Initial release

This is a simple Python 3 tool to measure features on electron micrographs. The tool was developed to evaluate micrographs of rusts where density of features (e.g how many thorns per unit surface) is often species-specific.

The UI is very simple, alternating between console and Matplotlib image display. Results are saved as .csv. User can reload old measurements and continue with measurements.

Measure features!

This is simple Python3 tool to measure (electron) micrographs. The development was initiated after realisation that simple and simply extendable tool for work with rust (Pucciniales) electron micrographies is needed. Tool allows measuring of various qualities and quantities, like density and surface area on the image.

For example, as is it in the case of rusts (Pucciniales), density of thorns on the selected surface can be different from species to species. The tools assists with measuring and provides .csv with measurements and .pdf with picture where the estimations were taken from.

Script has been developed jointly by Dr Barbara Piskur (Slovenian Forestry Insitute) and Dr Janez Presern (Agricultural Institute of Slovenia). Authors were supported by by ARRS Z4-5518 (to BP) and ARRS P4-0133 (JP).