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test_mpc.yml
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name: Test MPC
on:
# Trigger tests on push
workflow_dispatch:
workflow_call:
pull_request:
branches:
- main
schedule:
# '*' is a special character in YAML, so string must be quoted
- cron: "0 8 * * *"
jobs:
build:
runs-on: ubuntu-latest
container: ghcr.io/fenics/dolfinx/dolfinx:nightly
strategy:
matrix:
build_mode: [Release, Debug]
petsc_arch:
[
linux-gnu-complex128-32,
linux-gnu-complex64-32,
linux-gnu-real64-32,
linux-gnu-real32-32,
]
# Due to: https://gitlab.com/petsc/petsc/-/issues/1288
CXX: [c++]
#, clang++]
CC: [cc]
#, clang]
# exclude:
# - CC: cc
# CXX: clang++
# - CC: clang
# CXX: c++
env:
DOLFINX_BRANCH: main
BASIX_BRANCH: main
UFL_BRANCH: main
FFCX_BRANCH: main
CC: ${{ matrix.CC }}
CXX: ${{ matrix.CXX }}
PETSC_ARCH: "${{ matrix.petsc_arch }}"
OMPI_ALLOW_RUN_AS_ROOT: 1
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
OMPI_MCA_rmaps_base_oversubscribe: 1
OMPI_MCA_plm: isolated
OMPI_MCA_btl_vader_single_copy_mechanism: none
OMPI_MCA_mpi_yield_when_idle: 1
OMPI_MCA_hwloc_base_binding_policy: none
HDF5_MPI: "ON"
HDF5_DIR: "/usr/local/"
MPC_BUILD_MODE: ${{ matrix.build_mode }}
MPC_CMAKE_CXX_FLAGS: "-Wall -Werror -g -pedantic -Ofast -march=native"
PYTHONPATH: "/usr/local/dolfinx-${PETSC_TYPE}/lib/python3.12/dist-packages:/usr/local/lib"
LD_LIBRARY_PATH: "/usr/local/petsc/${PETSC_ARCH}/lib/:/usr/local"
DEB_PYTHON_INSTALL_LAYOUT: deb_system
steps:
- uses: actions/checkout@v4
- name: Install clang
if: ${{ matrix.CC }} == "clang"
run: |
apt-get update
apt-get install -y clang
- name: upgrade pip
run: python3 -m pip install --upgrade setuptools pip
- name: Check formatting
run: |
python3 -m pip install ruff
ruff check
ruff format
- name: Check typing
run: |
python3 -m pip install mypy
cd python
python3 -m mypy . --exclude=build
- name: Install h5py
run: |
python3 -m pip install --no-build-isolation --no-cache-dir --no-binary=h5py h5py
- name: Install DOLFINx
uses: jorgensd/actions/install-dolfinx@v0.4
with:
dolfinx: ${{ env.DOLFINX_BRANCH }}
ufl: ${{ env.UFL_BRANCH }}
basix: ${{ env.BASIX_BRANCH }}
ffcx: ${{ env.FFCX_BRANCH }}
petsc_arch: ${{ env.PETSC_ARCH }}
- name: Install DOLFINx-MPC (C++)
run: |
cmake -G Ninja -B build-dir -DCMAKE_BUILD_TYPE=${MPC_BUILD_MODE} -DCMAKE_CXX_FLAGS="${MPC_CMAKE_CXX_FLAGS}" -S cpp/
cmake --build build-dir --parallel 3
cmake --install build-dir
- name: Install DOLFINx-MPC (Python)
run: python3 -m pip -v install --config-settings=cmake.build-type=${MPC_BUILD_MODE} --no-build-isolation -e python/[test]
- name: Run tests (serial)
run: coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs
- name: Run tests (2 processes)
run: mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs
- name: Run tests (3 processes)
run: mpirun -n 3 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/
- name: Run tests (4 processes)
run: mpirun -n 4 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/
- name: Run benchmarks
run: |
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_periodic.py --nref=2 --tet --gamg --timings
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_elasticity_edge.py --nref=2 --gamg --timings
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_contact_3D.py
- name: Run demos (serial)
run: |
coverage run --rcfile=.coveragerc python/demos/demo_elasticity.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic_geometrical.py
coverage run --rcfile=.coveragerc python/demos/demo_stokes.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic3d_topological.py
coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect_2D.py
coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic_gep.py
- name: Run demos (parallel)
run: |
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_geometrical.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_stokes.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic3d_topological.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect_2D.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_gep.py
- name: Run contact demos 2D (serial)
run: |
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
- name: Run contact demos 2D (parallel)
run: |
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
- name: Run contact demos 3D (serial)
run: |
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
- name: Run contact demos 3D (parallel)
run: |
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
- name: Combine coverage reports
run: |
coverage combine
coverage report -m
coverage html
- name: Upload coverage report as artifact
if: matrix.build_mode == 'Release' && matrix.petsc_arch == 'linux-gnu-real64-32' && matrix.CC == 'cc' && matrix.CXX == 'c++'
uses: actions/upload-artifact@v4
with:
name: code-coverage-report
path: htmlcov
if-no-files-found: error