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Utility functions for working with DICOM and BIDS neuroimaging data

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jmtyszka/bidskit

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BIDSKIT

Python utilities for converting from DICOM to BIDS neuroimaging formats.

The bidskit console command takes a directory tree containing imaging series from one or more subjects (eg T1w MPRAGE, BOLD EPI, Fieldmaps), converts the imaging data to Nifti-1 format with JSON metadata files (sidecars) and populates a directory tree according to the latest BIDS specification.

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Bugs and Feature Requests

Let us know about bugs and feature requests through this repo's GitHub Issues page.

Related Projects

  • heudiconv General purpose heuristic DICOM converter
  • dcm2bids Christophe Beddetti's DICOM to BIDS converter