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maricaantonaccimaricaantonacci
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Fixes identation
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‎amber/amber_job_onedata.yaml

+142-99
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@@ -7,106 +7,149 @@ description: >
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TOSCA examples for specifying a Chronos Job that runs an application using Onedata storage.
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topology_template:
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inputs:
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input_onedata_token:
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type: string
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description: User token required to mount the user's INPUT Onedata space
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required: yes
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default: ""
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output_onedata_token:
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type: string
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description: User token required to mount the user's OUTPUT Onedata space. It can be the same as the input token
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required: yes
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default: ""
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input_onedata_providers:
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type: string
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description: csv list of favorite Onedata providers to be used to mount the Input Onedata space. If not provided, data locality algo will be applied.
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default: ''
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required: no
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output_onedata_providers:
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type: string
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description: csv list of favorite Onedata providers to be used to mount the Output Onedata space. If not provided, the same provider(s) used to mount the input space will be used.
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default: ''
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required: no
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input_onedata_space:
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type: string
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description: Onedata space where the application input data are stored
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required: yes
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default: ""
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input_path:
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type: string
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description: Path to the input data inside the Input Onedata space
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required: yes
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default: ""
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output_onedata_space:
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type: string
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description: Onedata space where the application output will be stored. It can be the same as the Input Onedata space
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required: yes
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default: ""
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inputs:
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input_onedata_token:
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type: string
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description: User token required to mount the user's INPUT Onedata space
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required: yes
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output_onedata_token:
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type: string
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description: User token required to mount the user's OUTPUT Onedata space. It can be the same as the input token
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required: yes
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input_onedata_providers:
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type: string
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description: csv list of favorite Onedata providers to be used to mount the Input Onedata space. If not provided, data locality algo will be applied.
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default: ''
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required: no
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output_onedata_providers:
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type: string
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description: csv list of favorite Onedata providers to be used to mount the Output Onedata space. If not provided, the same provider(s) used to mount the input space will be used.
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default: ''
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required: no
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input_onedata_space:
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type: string
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description: Onedata space where the application input data are stored
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required: yes
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input_path:
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type: string
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description: Path to the input data inside the Input Onedata space
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required: yes
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output_onedata_space:
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type: string
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description: Onedata space where the application output will be stored. It can be the same as the Input Onedata space
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required: yes
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output_filenames:
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type: string
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description: csv list of filenames generated by the application run
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default: ''
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required: yes
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cpus:
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type: float
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description: Amount of CPUs for this job
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required: yes
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mem:
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type: scalar-unit.size
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description: Amount of Memory for this job
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required: yes
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node_templates:
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output_path:
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type: string
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description: Path to the output data inside the Output Onedata space
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required: yes
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default: ""
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chronos_job1:
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type: tosca.nodes.indigo.Container.Application.Docker.Chronos
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properties:
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schedule: 'R0/2015-12-25T17:22:00Z/PT1M'
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description: 'Execute Application'
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command: 'cd $MESOS_SANDBOX && wget https://raw.githubusercontent.com/maricaantonacci/e-RSH/master/scripts/Lifewatch/lifewatch_run.sh && /bin/bash lifewatch_run.sh'
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uris: []
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retries: 3
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environment_variables:
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TEMP: 'TEMP_1'
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INPUT_ONEDATA_TOKEN: { get_input: input_onedata_token }
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OUTPUT_ONEDATA_TOKEN: { get_input: output_onedata_token }
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INPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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OUTPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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INPUT_ONEDATA_SPACE: { get_input: input_onedata_space }
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INPUT_PATH: { get_input: input_path }
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OUTPUT_ONEDATA_SPACE: { get_input: output_onedata_space }
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OUTPUT_PATH: 'OUTPUT_PATH_1'
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OUTPUT_FILENAMES: { get_input: output_filenames }
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artifacts:
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image:
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file: 'marica/barridocker-oneclient' #TO BE MOVED UNDER INDIGO-DC
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type: tosca.artifacts.Deployment.Image.Container.Docker
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requirements:
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- host: docker_runtime
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output_filenames:
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type: string
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description: csv list of filenames generated by the application run
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default: ''
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required: yes
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chronos_job2:
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type: tosca.nodes.indigo.Container.Application.Docker.Chronos
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properties:
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schedule: 'R0/2015-12-25T17:22:00Z/PT1M'
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description: 'Execute Application'
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command: 'cd $MESOS_SANDBOX && wget https://raw.githubusercontent.com/maricaantonacci/e-RSH/master/scripts/Lifewatch/lifewatch_run.sh && /bin/bash lifewatch_run.sh'
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uris: []
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retries: 3
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environment_variables:
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TEMP: 'TEMP_2'
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INPUT_ONEDATA_TOKEN: { get_input: input_onedata_token }
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OUTPUT_ONEDATA_TOKEN: { get_input: output_onedata_token }
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INPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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OUTPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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INPUT_ONEDATA_SPACE: { get_input: input_onedata_space }
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INPUT_PATH: { get_input: input_path }
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OUTPUT_ONEDATA_SPACE: { get_input: output_onedata_space }
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OUTPUT_PATH: 'OUTPUT_PATH_2'
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OUTPUT_FILENAMES: { get_input: output_filenames }
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artifacts:
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image:
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file: 'marica/barridocker-oneclient' #TO BE MOVED UNDER INDIGO-DC
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type: tosca.artifacts.Deployment.Image.Container.Docker
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requirements:
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- host: docker_runtime
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chronos_job3:
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type: tosca.nodes.indigo.Container.Application.Docker.Chronos
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properties:
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schedule: 'R0/2015-12-25T17:22:00Z/PT1M'
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description: 'Execute Application'
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command: 'cd $MESOS_SANDBOX && wget https://raw.githubusercontent.com/maricaantonacci/e-RSH/master/scripts/Lifewatch/lifewatch_run.sh && /bin/bash lifewatch_run.sh'
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uris: []
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retries: 3
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environment_variables:
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TEMP: 'TEMP_3'
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INPUT_ONEDATA_TOKEN: { get_input: input_onedata_token }
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OUTPUT_ONEDATA_TOKEN: { get_input: output_onedata_token }
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INPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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OUTPUT_ONEDATA_PROVIDERS: { get_input: output_onedata_providers }
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INPUT_ONEDATA_SPACE: { get_input: input_onedata_space }
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INPUT_PATH: { get_input: input_path }
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OUTPUT_ONEDATA_SPACE: { get_input: output_onedata_space }
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OUTPUT_PATH: 'OUTPUT_PATH_3'
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OUTPUT_FILENAMES: { get_input: output_filenames }
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artifacts:
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image:
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file: 'marica/barridocker-oneclient' #TO BE MOVED UNDER INDIGO-DC
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type: tosca.artifacts.Deployment.Image.Container.Docker
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requirements:
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- host: docker_runtime
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cpus:
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type: float
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description: Amount of CPUs for this job
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required: yes
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default: 1.0
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mem:
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type: scalar-unit.size
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description: Amount of Memory for this job
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required: yes
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default: 1 GB
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node_templates:
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chronos_job:
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type: tosca.nodes.indigo.Container.Application.Docker.Chronos
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properties:
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schedule: 'R0/2015-12-25T17:22:00Z/PT1M'
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description: 'Execute Application'
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command: 'cd $MESOS_SANDBOX && wget https://raw.githubusercontent.com/indigo-dc/tosca-templates/add_chronos_templates/amber/scripts/amber_run.sh && /bin/bash amber_run.sh'
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uris: []
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retries: 3
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environment_variables:
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INPUT_ONEDATA_TOKEN: { get_input: input_onedata_token }
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OUTPUT_ONEDATA_TOKEN: { get_input: output_onedata_token }
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INPUT_ONEDATA_PROVIDERS: 'INPUT_ONEDATA_PROVIDERS_TO_BE_SET_BY_THE_ORCHESTRATOR'
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OUTPUT_ONEDATA_PROVIDERS: 'OUTPUT_ONEDATA_PROVIDERS_TO_BE_SET_BY_THE_ORCHESTRATOR'
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INPUT_ONEDATA_SPACE: { get_input: input_onedata_space }
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INPUT_PATH: { get_input: input_path }
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OUTPUT_ONEDATA_SPACE: { get_input: output_onedata_space }
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OUTPUT_PATH: { get_input: output_path }
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OUTPUT_FILENAMES: { get_input: output_filenames }
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artifacts:
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image:
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file: indigodatacloudapps/ambertools-oneclient:latest
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type: tosca.artifacts.Deployment.Image.Container.Docker
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requirements:
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- host: docker_runtime1
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docker_runtime1:
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type: tosca.nodes.indigo.Container.Runtime.Docker
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capabilities:
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host:
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properties:
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num_cpus: { get_input: cpus }
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mem_size: { get_input: mem }
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docker_runtime:
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type: tosca.nodes.indigo.Container.Runtime.Docker
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capabilities:
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host:
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properties:
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num_cpus: { get_input: cpus }
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mem_size: { get_input: mem }

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