From e042fcfd6c0b1ebc420765b3524ec7525f1952c8 Mon Sep 17 00:00:00 2001
From: Kevin Rue <kevinrue@users.noreply.github.com>
Date: Tue, 30 Jul 2024 10:24:28 +0100
Subject: [PATCH] add missing Suggests

---
 DESCRIPTION                           | 5 ++++-
 vignettes/workshop_isee_extension.Rmd | 1 +
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index b537d7a..d34af84 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -42,13 +42,16 @@ Imports:
 Suggests:
     airway,
     BiocStyle,
+    DESeq2,
     fgsea,
     knitr,
     org.Hs.eg.db,
     pkgdown,
     rmarkdown,
     scRNAseq,
-    scater
+    scater,
+    scuttle,
+    sessioninfo
 URL: https://isee.github.io/iSEEDemoEuroBioC2024/
 BugReports: https://github.com/iSEE/iSEEDemoEuroBioC2024/issues/new/choose
 VignetteBuilder: knitr
diff --git a/vignettes/workshop_isee_extension.Rmd b/vignettes/workshop_isee_extension.Rmd
index ef61d37..de4d7c0 100644
--- a/vignettes/workshop_isee_extension.Rmd
+++ b/vignettes/workshop_isee_extension.Rmd
@@ -212,6 +212,7 @@ To simulate a short analytical workflow, let us run some more code from the `?iS
 
 ```{r, message=FALSE, warning=FALSE}
 library(scater)
+library(scuttle)
 sce <- logNormCounts(sce, exprs_values="tophat_counts")
 
 sce <- runPCA(sce, ncomponents=4)