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environment_linux_gpu.yml
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name: CytoCommunity_gpu
channels:
- pyg
- bioconda
- pytorch
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.1=anacondar_1
- aiohappyeyeballs=2.4.3=py310h06a4308_0
- aiohttp=3.10.5=py310h5eee18b_0
- aiosignal=1.2.0=pyhd3eb1b0_0
- async-timeout=4.0.3=py310h06a4308_0
- attrs=24.2.0=py310h06a4308_0
- binutils_impl_linux-64=2.40=hf600244_0
- blas=1.0=mkl
- brotli=1.0.9=h166bdaf_8
- brotli-bin=1.0.9=h166bdaf_8
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.19.1=hd590300_0
- ca-certificates=2023.5.7=hbcca054_0
- cairo=1.16.0=ha61ee94_1014
- certifi=2023.5.7=pyhd8ed1ab_0
- charset-normalizer=3.1.0=pyhd8ed1ab_0
- colorama=0.4.6=pyhd8ed1ab_0
- contourpy=1.0.7=py310hdf3cbec_0
- cuda-cudart=12.4.127=h99ab3db_0
- cuda-cudart_linux-64=12.4.127=hd681fbe_0
- cuda-cupti=12.4.127=h6a678d5_1
- cuda-libraries=12.4.1=h06a4308_1
- cuda-nvrtc=12.4.127=h99ab3db_1
- cuda-nvtx=12.4.127=h6a678d5_1
- cuda-opencl=12.4.127=h6a678d5_0
- cuda-runtime=12.4.1=hb982923_0
- cuda-version=12.4=hbda6634_3
- curl=8.1.1=h409715c_0
- cycler=0.11.0=pyhd8ed1ab_0
- expat=2.5.0=hcb278e6_1
- ffmpeg=4.3=hf484d3e_0
- filelock=3.13.1=py310h06a4308_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.39.4=py310h2372a71_0
- freetype=2.12.1=hca18f0e_1
- fribidi=1.0.10=h36c2ea0_0
- frozenlist=1.5.0=py310h5eee18b_0
- fsspec=2024.6.1=py310h06a4308_0
- gcc_impl_linux-64=12.2.0=hcc96c02_19
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=12.2.0=h55be85b_19
- gmp=6.2.1=h58526e2_0
- gmpy2=2.1.2=py310heeb90bb_0
- gnutls=3.6.13=h85f3911_1
- graphite2=1.3.13=h58526e2_1001
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=12.2.0=hcc96c02_19
- harfbuzz=6.0.0=h8e241bc_0
- icu=70.1=h27087fc_0
- idna=3.4=pyhd8ed1ab_0
- intel-openmp=2021.4.0=h06a4308_3561
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.2.0=pyhd8ed1ab_0
- jpeg=9e=h0b41bf4_3
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.4=py310hbf28c38_1
- krb5=1.20.1=h81ceb04_0
- lame=3.100=h166bdaf_1003
- lcms2=2.15=hfd0df8a_0
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=12_linux64_mkl
- libbrotlicommon=1.0.9=h166bdaf_8
- libbrotlidec=1.0.9=h166bdaf_8
- libbrotlienc=1.0.9=h166bdaf_8
- libcblas=3.9.0=12_linux64_mkl
- libcublas=12.4.5.8=h99ab3db_1
- libcufft=11.2.1.3=h99ab3db_1
- libcufile=1.9.1.3=h99ab3db_1
- libcurand=10.3.5.147=h99ab3db_1
- libcurl=8.1.1=h409715c_0
- libcusolver=11.6.1.9=h99ab3db_1
- libcusparse=12.3.1.170=h99ab3db_1
- libdeflate=1.17=h0b41bf4_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc-devel_linux-64=12.2.0=h3b97bd3_19
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.76.3=hebfc3b9_0
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=12_linux64_mkl
- libnghttp2=1.52.0=h61bc06f_0
- libnpp=12.2.5.30=h99ab3db_1
- libnsl=2.0.0=h7f98852_0
- libnvfatbin=12.4.127=h7934f7d_2
- libnvjitlink=12.4.127=h99ab3db_1
- libnvjpeg=12.3.1.117=h6a678d5_1
- libpng=1.6.39=h753d276_0
- libsanitizer=12.2.0=h46fd767_19
- libsqlite=3.42.0=h2797004_0
- libssh2=1.10.0=hf14f497_3
- libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.5.0=h6adf6a1_2
- libuuid=2.38.1=h0b41bf4_0
- libuv=1.44.2=h166bdaf_0
- libwebp-base=1.3.0=h0b41bf4_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=h166bdaf_4
- llvm-openmp=14.0.6=h9e868ea_0
- make=4.3=hd18ef5c_1
- markupsafe=2.1.2=py310h1fa729e_0
- matplotlib-base=3.7.1=py310he60537e_0
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py310ha2c4b55_0
- mkl_fft=1.3.1=py310h2b4bcf5_1
- mkl_random=1.2.2=py310h00e6091_0
- mpc=1.1.0=h10f8cd9_1
- mpfr=4.0.2=hb69a4c5_1
- mpmath=1.3.0=py310h06a4308_0
- multidict=6.1.0=py310h5eee18b_0
- munkres=1.0.7=py_1
- ncurses=6.3=h27087fc_1
- nettle=3.6=he412f7d_0
- networkx=3.3=py310h06a4308_0
- numpy=1.24.3=py310hd5efca6_0
- numpy-base=1.24.3=py310h8e6c178_0
- ocl-icd=2.3.2=h5eee18b_1
- openh264=2.1.1=h780b84a_0
- openjpeg=2.5.0=hfec8fc6_2
- openssl=3.1.0=hd590300_3
- packaging=23.1=pyhd8ed1ab_0
- pandas=1.5.0=py310h769672d_0
- pango=1.50.14=hd33c08f_0
- patsy=0.5.3=pyhd8ed1ab_0
- pcre2=10.40=hc3806b6_0
- pillow=9.4.0=py310h023d228_1
- pip=23.1.2=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- platformdirs=3.5.1=pyhd8ed1ab_0
- pooch=1.7.0=pyha770c72_3
- propcache=0.2.0=py310h5eee18b_0
- psutil=5.9.0=py310h5eee18b_0
- pthread-stubs=0.4=h36c2ea0_1001
- pyg=2.6.1=py310_torch_2.4.0_cu124
- pyparsing=3.0.9=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.10.6=ha86cf86_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.10=3_cp310
- pytorch=2.4.1=py3.10_cuda12.4_cudnn9.1.0_0
- pytorch-cluster=1.6.3=py310_torch_2.4.0_cu124
- pytorch-cuda=12.4=hc786d27_7
- pytorch-mutex=1.0=cuda
- pytorch-scatter=2.1.2=py310_torch_2.4.0_cu124
- pytorch-sparse=0.6.18=py310_torch_2.4.0_cu124
- pytz=2023.3=pyhd8ed1ab_0
- pyyaml=6.0.2=py310h5eee18b_0
- r=4.2=r42hd8ed1ab_1006
- r-base=4.2.3=ha7d60f8_0
- r-boot=1.3_28.1=r42hc72bb7e_0
- r-class=7.3_22=r42h57805ef_0
- r-cluster=2.1.4=r42h8da6f51_0
- r-codetools=0.2_19=r42hc72bb7e_0
- r-foreign=0.8_84=r42h133d619_0
- r-kernsmooth=2.23_21=r42h13b3f57_0
- r-lattice=0.21_8=r42h133d619_0
- r-mass=7.3_60=r42h57805ef_0
- r-matrix=1.5_4.1=r42h316c678_0
- r-mgcv=1.8_42=r42he1ae0d6_0
- r-nlme=3.1_162=r42hac0b197_0
- r-nnet=7.3_19=r42h57805ef_0
- r-recommended=4.2=r42hd8ed1ab_1005
- r-rpart=4.1.19=r42h06615bd_0
- r-spatial=7.3_16=r42h133d619_0
- r-survival=3.5_5=r42h133d619_0
- readline=8.2=h8228510_1
- requests=2.31.0=pyhd8ed1ab_0
- scikit-learn=1.2.2=py310h41b6a48_1
- scipy=1.10.1=py310hd5efca6_0
- seaborn=0.12.0=hd8ed1ab_0
- seaborn-base=0.12.0=pyhd8ed1ab_0
- sed=4.8=he412f7d_0
- setuptools=67.7.2=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- statsmodels=0.14.0=py310h278f3c1_1
- sympy=1.13.2=py310h06a4308_0
- sysroot_linux-64=2.12=he073ed8_15
- threadpoolctl=3.1.0=pyh8a188c0_0
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- torchaudio=2.4.1=py310_cu124
- torchtriton=3.0.0=py310
- torchvision=0.15.2=cpu_py310h83e0c9b_0
- tqdm=4.65.0=pyhd8ed1ab_1
- typing-extensions=4.6.0=hd8ed1ab_0
- typing_extensions=4.6.0=pyha770c72_0
- tzdata=2023c=h71feb2d_0
- unicodedata2=15.0.0=py310h5764c6d_0
- urllib3=2.0.2=pyhd8ed1ab_0
- wheel=0.40.0=pyhd8ed1ab_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7b6447c_0
- yarl=1.18.0=py310h5eee18b_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h3eb15da_6