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DESCRIPTION
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Package: Hmsc
Title: Hierarchical Model of Species Communities
Type: Package
Version: 3.1-3
Authors@R: c(person(given = "Gleb", family="Tikhonov", role="aut"),
person(given="Otso", family="Ovaskainen",
email="otso.ovaskainen@helsinki.fi",
comment = c(ORCID="0000-0001-9750-4421"), role=c("aut", "cre")),
person(given="Jari", family="Oksanen", role=c("aut"),
email="jhoksane@gmail.com"),
person(given="Melinda", family=c("de", "Jonge"), role="aut"),
person(given="Oystein", family="Opedal", role="aut"),
person(given="Tad", family="Dallas", role="aut"))
Description: Hierarchical Modelling of Species Communities (HMSC) is
a model-based approach for analyzing community ecological data.
This package implements it in the Bayesian framework with Gibbs
Markov chain Monte Carlo (MCMC) sampling (Tikhonov et al. (2020)
<doi:10.1111/2041-210X.13345>).
License: GPL-3 | file LICENSE
URL: https://www.helsinki.fi/en/researchgroups/statistical-ecology/software/hmsc
BugReports: https://github.com/hmsc-r/HMSC/issues/
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Suggests: R.rsp,
testthat,
corrplot
VignetteBuilder: R.rsp
Depends:
R (>= 3.0.2),
coda
Imports:
abind,
ape,
BayesLogit,
fields,
FNN,
ggplot2,
MASS,
Matrix,
matrixStats,
MCMCpack,
methods,
nnet,
rlang,
parallel,
pracma,
pROC,
sp,
statmod,
truncnorm