update README

gongyh · Oct 31, 2024 · ed17a9d · ed17a9d
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commit ed17a9d
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diff --git a/README.md b/README.md
@@ -27,3 +27,4 @@ Multi-package containers for nf-core-scgs pipeline
 | BBNORM | fastx_toolkit=0.0.14,bbmap=39.01 | mulled-v2-0f45a2e9949b9309cc37635f57bff7a66baf8095:86172d512030702a6bdb7b2cd7e301c3e1a14e56 | quay.io/scgs/mulled-v2-0f45a2e9949b9309cc37635f57bff7a66baf8095:86172d512030702a6bdb7b2cd7e301c3e1a14e56-1 | https://depot.galaxyproject.org/singularity/mulled-v2-0f45a2e9949b9309cc37635f57bff7a66baf8095:86172d512030702a6bdb7b2cd7e301c3e1a14e56-1 |
 | MGPGTOOLS | python=3.10.14,odgi=0.8.4,seqkit=2.8.0,gfapy=1.2.3,clustalw=2.1,gffread=0.12.7,aster=1.16,biopython=1.83,toytree=3.0.1,pandas=2.2.1,numpy=1.26.4,prettytable=3.10.0,mummer4=4.0.0rc1 | mulled-v2-089d7a065ba2c540b6ac7fe9ae1819e5e40ec7b4:23979f6d41a67b9e859697c2a8a32a23894041ee | quay.io/scgs/mulled-v2-089d7a065ba2c540b6ac7fe9ae1819e5e40ec7b4:23979f6d41a67b9e859697c2a8a32a23894041ee-0 | https://depot.galaxyproject.org/singularity/mulled-v2-089d7a065ba2c540b6ac7fe9ae1819e5e40ec7b4:23979f6d41a67b9e859697c2a8a32a23894041ee-0 |
 | PASA | python=3.7.10,biopython=1.79,bedtools=2.30.0,prodigal=2.6.3,cd-hit=4.8.1,blast=2.13.0,hmmer=3.3.2,diamond=2.0.14,mcl=14.137,mafft=7.526,parallel=20220222,numpy=1.21.6,scipy=1.7.3,numba=0.56.3,networkx=2.6.3,pandas=1.3.5,perl-bioperl=1.7.8 | mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:34fb1060499c2c2fc71354290282dcd6cba7a68b | quay.io/scgs/mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:34fb1060499c2c2fc71354290282dcd6cba7a68b-0 | https://depot.galaxyproject.org/singularity/mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:34fb1060499c2c2fc71354290282dcd6cba7a68b-0 |
+| PASA2 | python=3.12.3,biopython=1.84,bedtools=2.30.0,prodigal=2.6.3,cd-hit=4.8.1,blast=2.13.0,hmmer=3.3.2,diamond=2.1.10,mcl=14.137,mafft=7.526,parallel=20220222,numpy=1.26.4,scipy=1.14.1,numba=0.59.1,networkx=2.6.3,pandas=2.2.3,perl-bioperl=1.7.8 | mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:c32998af85c0bad16098c2058913b09d9e367237 | quay.io/scgs/mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:c32998af85c0bad16098c2058913b09d9e367237-0 | https://depot.galaxyproject.org/singularity/mulled-v2-13e4a6d8b6a43c8cebffef2d3a782f9859e04bd8:c32998af85c0bad16098c2058913b09d9e367237-0 |