Merge pull request #946 from glotzerlab/release/v2.9.0

Release/v2.9.0
glotzerlab · Apr 19, 2022 · e3d738c · e3d738c
2 parents b11763c + ff31054
commit e3d738c
Show file tree

Hide file tree

Showing 11 changed files with 32 additions and 32 deletions.
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -5,7 +5,7 @@ exclude: (?:^extern/)
 
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: 'v4.1.0'
+    rev: 'v4.2.0'
     hooks:
       - id: end-of-file-fixer
         exclude: |
@@ -29,7 +29,7 @@ repos:
       - id: debug-statements
       - id: requirements-txt-fixer
   - repo: https://github.com/asottile/pyupgrade
-    rev: 'v2.31.1'
+    rev: 'v2.32.0'
     hooks:
       - id: pyupgrade
         args:
@@ -56,7 +56,7 @@ repos:
     hooks:
       - id: cmake-format
   - repo: https://github.com/pre-commit/mirrors-clang-format
-    rev: 'v13.0.1'
+    rev: 'v14.0.1'
     hooks:
       - id: clang-format
         types_or: [c, c++]

diff --git a/ChangeLog.md b/ChangeLog.md
@@ -4,7 +4,7 @@ The format is based on
 and this project adheres to
 [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## vX.Y.Z -- XXXX-XX-XX
+## v2.9.0 -- 2022-04-19
 
 ### Added
 * (breaking) Some `freud.diffraction.StaticStructureFactorDebye` property names changed to be more descriptive.

diff --git a/contributors.txt b/contributors.txt
@@ -1,55 +1,56 @@
-  2332	Bradley Dice <bdice@bradleydice.com>
-  2135	Vyas Ramasubramani <vramasub@umich.edu>
+  2355	Bradley Dice <bdice@bradleydice.com>
+  2143	Vyas Ramasubramani <vramasub@umich.edu>
   1030	Eric Harper <harperic@umich.edu>
    456	Jin Soo Ihm <jinihm@umich.edu>
    294	Joshua A. Anderson <joaander@umich.edu>
    240	Matthew Spellings <mspells@umich.edu>
+   180	Tommy Waltmann <tomwalt@umich.edu>
    167	Kelly Wang <kelwang@umich.edu>
-   118	DomFijan <domagoj.fijan@gmail.com>
-   111	Tommy Waltmann <tomwalt@umich.edu>
+   126	DomFijan <domagoj.fijan@gmail.com>
+   119	dependabot <dependabot[bot]@users.noreply.github.com>
    110	Erin Teich <erteich@umich.edu>
-    97	dependabot <dependabot[bot]@users.noreply.github.com>
     86	Brandon Butler <butlerbr@umich.edu>
     66	M. Eric Irrgang <eirrgang@umich.edu>
     62	Charlotte Shiqi Zhao <zshiqi@umich.edu>
     53	Chrisy Du <xiyudu@umich.edu>
     41	Yezhi Jin <jinyezhi@umich.edu>
     40	Antonio Osorio <aosorio@umich.edu>
+    37	pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
     35	Michael Stryk <mstryk@umich.edu>
-    34	pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
     31	Richmond Newman <newmanrs@umich.edu>
     26	Andrew Kerr <kerrand@protonmail.com>
-    25	Andrew Kerr <andrewghkerr@gmail.com>
     25	Carl Simon Adorf <csadorf@umich.edu>
+    25	Andrew Kerr <andrewghkerr@gmail.com>
     22	Jens Glaser <jsglaser@umich.edu>
     20	Tim Moore <mtimc@umich.edu>
     13	Pavel Buslaev <pbuslaev@gmail.com>
+    10	Matt Palathingal <mattjose@umich.edu>
     10	Benjamin Schultz <baschult@umich.edu>
     10	Bryan VanSaders <bvansade@umich.edu>
-    10	Matt Palathingal <mattjose@umich.edu>
      9	Andrew Karas <askaras@umich.edu>
      9	Mike Henry <mikehenry@boisestate.edu>
      9	SyedZiaul <89724726+SyedZiaul@users.noreply.github.com>
-     8	Fengyi Gao <gaofy@umich.edu>
      8	Ryan Marson <rmarson@umich.edu>
-     6	Allen LaCour <alacour@umich.edu>
-     6	James Proctor <jproc@umich.edu>
-     6	Pengji Zhou <zhoupj@umich.edu>
+     8	Fengyi Gao <gaofy@umich.edu>
      6	Tom Grubb <tgrubb@umich.edu>
+     6	James Proctor <jproc@umich.edu>
+     6	Allen LaCour <alacour@umich.edu>
      6	Yina Geng <yinageng@umich.edu>
+     6	Pengji Zhou <zhoupj@umich.edu>
      5	Alex Dutton <alxdttn@umich.edu>
      5	Carolyn Phillips <phillicl@umich.edu>
-     4	Ben Swerdlow <benswerd@umich.edu>
-     4	James Antonaglia <jamesaan@umich.edu>
      4	Mayank Agrawal <amayank@umich.edu>
      4	William Zygmunt <wzygmunt@umich.edu>
-     3	Greg van Anders <grva@umich.edu>
+     4	Ben Swerdlow <benswerd@umich.edu>
+     4	James Antonaglia <jamesaan@umich.edu>
      3	Rose Cersonsky <rosecers@umich.edu>
+     3	Greg van Anders <grva@umich.edu>
      3	Wenbo Shen <shenwb@umich.edu>
      2	Emily Siew <esiew@umich.edu>
      2	Maya Martirossyan <mmm457@cornell.edu>
-     1	Dylan Marx <marxd1@umich.edu>
-     1	Jiwoong Yu <jiwoongs0510@gmail.com>
-     1	Patrick Lawton <plawton@umich.edu>
-     1	Paul Dodd <pdodd@umich.edu>
      1	Roy Kid <lijichen365@126.com>
+     1	Paul Dodd <pdodd@umich.edu>
+     1	Patrick Lawton <plawton@umich.edu>
+     1	Luis Y. Rivera-Rivera <lyrivera@umich.edu>
+     1	Jiwoong Yu <jiwoongs0510@gmail.com>
+     1	Dylan Marx <marxd1@umich.edu>
diff --git a/doc/source/conf.py b/doc/source/conf.py
@@ -70,8 +70,8 @@
 # built documents.
 #
 # version and release are set the same for this package.
-version = "2.8.0"
-release = "2.8.0"
+version = "2.9.0"
+release = "2.9.0"
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

diff --git a/doc/source/gettingstarted/examples b/doc/source/gettingstarted/examples
diff --git a/doc/source/gettingstarted/installation.rst b/doc/source/gettingstarted/installation.rst
@@ -30,7 +30,7 @@ The code below will install **freud** from `PyPI <https://pypi.org/project/freud
 Compile from source
 -------------------
 
-The following are **required** for installing **freud**:
+The following are **required** for building and installing **freud** from source:
 
 - A C++14-compliant compiler
 - `Python <https://www.python.org/>`__ (>=3.6)

diff --git a/extern/voro++ b/extern/voro++
diff --git a/freud/__init__.py b/freud/__init__.py
@@ -23,7 +23,7 @@
 # automatic selection runs, the user cannot change it.
 set_num_threads(0)
 
-__version__ = "2.8.0"
+__version__ = "2.9.0"
 
 __all__ = [
     "__version__",

diff --git a/requirements.txt b/requirements.txt
@@ -1,4 +1,3 @@
-cython>=0.29.14
 numpy>=1.14
 rowan>=1.2.1
 scipy>=1.1
diff --git a/setup.cfg b/setup.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 2.8.0
+current_version = 2.9.0
 commit = True
 tag = False
 message = Bump up to version {new_version}.

diff --git a/setup.py b/setup.py
@@ -5,7 +5,7 @@
 
 from skbuild import setup
 
-version = "2.8.0"
+version = "2.9.0"
 
 # Read README for PyPI, fallback to short description if it fails.
 description = "Powerful, efficient trajectory analysis in scientific Python."
+4 −4		.github/workflows/test.yml
+3 −3		.pre-commit-config.yaml
+1 −1		archive/demos/afrl_helpers.py
+1 −1		archive/demos/aps_helpers.py
+1 −1		archive/demos/util.py
+1 −0		contributors.txt
+1 −1		examples/Benchmarking RDF against MDAnalysis.ipynb
+1 −1		examples/Using Machine Learning for Structural Identification.ipynb
+6 −6		module_intros/diffraction.StaticStructureFactor.ipynb
+3 −3		module_intros/environment.LocalDescriptors.ipynb
+1 −1		module_intros/interface.Interface.ipynb
+1 −1		module_intros/order.Hexatic-Minkowski.ipynb
+2 −2		module_intros/order.Steinhardt.ipynb
+2 −2		module_intros/pmft.PMFTXY.ipynb
+1 −1		util.py
+34 −24		CMakeLists.txt
+64 −0		src/cell.cc
+7 −0		src/cell.hh
+4 −2		src/container_prd.cc