Fixes/remove phased check (#13) #96
seppinhoAnnotations
3 errors and 8 warnings
|
build
The provided VCF file is malformed. Error during index creation: Input file is not in valid block compressed format., for input source: /home/runner/work/imputationserver-utils/imputationserver-utils/test-data/data/unorderd/minimac_test.50.vcf.gz
|
|
build
Your upload data contains chromosome 'chr20'. This is not a valid hg19 encoding. Please ensure that your input data is build hg19 and chromosome is encoded as '20'.
|
|
build
No genotypes found in the VCF file. It appears the file contains only the header.
|
|
build
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
|
build
Skip allele frequency check.
|
|
build
Skip allele frequency check.
|
|
build
Uploaded data is hg38 and reference is hg19.
|
|
build
Uploaded data is hg19 and reference is hg38.
|
|
build
Skip allele frequency check.
|
|
build
Skip allele frequency check.
|
|
build
Uploaded data is hg19 and reference is hg38.
|