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@genepi

Institute of Genetic Epidemiology

Medical University of Innsbruck

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  1. cloudgene Public

    A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

    Java 37 19

  2. imputationserver Public

    Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    Java 80 46

  3. nf-gwas Public

    A nextflow pipeline to perform state-of-the-art genome-wide association studies.

    Nextflow 65 26

  4. haplogrep3 Public

    Free mtDNA Haplogroup Classification Service

    Java 25 2

  5. mtdna-server-2 Public

    mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes

    Nextflow 13

  6. haplocheck Public

    Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies

    HTML 18 2

Repositories

Showing 10 of 59 repositories
  • cloudgene3 Public

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    Java 16 MIT 5 1 0 Updated Apr 13, 2025
  • HTML 0 0 0 0 Updated Apr 11, 2025
  • umi-pipeline-nf Public

    Nextflow pipeline to analyze ONT-UMI-Sequencing data

    Python 4 MPL-2.0 2 0 0 Updated Apr 8, 2025
  • ngs-class Public

    Next Gen Sequencing Course - Medical University of Innsbruck

    Nextflow 2 1 0 0 Updated Mar 21, 2025
  • nf-gwas Public

    A nextflow pipeline to perform state-of-the-art genome-wide association studies.

    Nextflow 65 MIT 26 10 0 Updated Mar 20, 2025
  • imputationserver2 Public

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    Nextflow 21 MIT 8 3 1 Updated Jan 16, 2025
  • mtdna-server-2 Public

    mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes

    Nextflow 13 MIT 0 5 0 Updated Dec 29, 2024
  • mitoverse Public

    Documentation for the Mitoverse Platform

    HTML 1 0 0 0 Updated Dec 29, 2024
  • HTML 3 MIT 3 1 0 Updated Dec 20, 2024
  • 0 MIT 1 0 1 Updated Dec 19, 2024

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