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Move all user-facing messages in CLI to stderr #1768

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Run time

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Job	Run time
build (3.7)	1m 48s
build (3.8)	1m 44s
build (3.9)	1m 42s
build (3.10)	1m 27s
build (3.11)	1m 44s
build (3.12)	2m 0s
build (3.13)	1m 48s
	12m 13s