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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(daseq)
export(drseq)
export(drseqCount)
export(drseqFilter)
export(drseqFit)
export(fa.plot)
export(faseq)
export(faseqCount)
export(faseqFit)
export(faseqInfer)
export(getIsoPartsList)
export(getRankings)
export(inferredFeature)
export(parseEvent)
export(prepDrseqAnno)
export(sampleData)
exportMethods(daseqResults)
exportMethods(drseqResults)
exportMethods(faseqResults)
exportMethods(genePartsList)
exportMethods(getAUC)
exportMethods(heatmapAUC)
exportMethods(plotDispFunc)
exportMethods(sampleData)
exportMethods(volcano.plot)
import(BiocGenerics)
import(DEXSeq)
import(GenomicRanges)
import(SummarizedExperiment)
import(doRNG)
import(foreach)
import(scales)
importFrom(BiocParallel,MulticoreParam)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(BiocParallel,multicoreWorkers)
importFrom(IRanges,DataFrameList)
importFrom(IRanges,FactorList)
importFrom(IRanges,IRanges)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,Hits)
importFrom(S4Vectors,List)
importFrom(S4Vectors,cbind)
importFrom(S4Vectors,elementNROWS)
importFrom(S4Vectors,from)
importFrom(S4Vectors,head)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,queryHits)
importFrom(S4Vectors,rbind)
importFrom(S4Vectors,to)
importFrom(doParallel,registerDoParallel)
importFrom(doParallel,stopImplicitCluster)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(dplyr,ungroup)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_distiller)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_distiller)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_size)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,scale_y_discrete)
importFrom(ggplot2,stat_function)
importFrom(ggplot2,stat_summary)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,unit)
importFrom(ggplot2,vars)
importFrom(magrittr,"%>%")
importFrom(methods,as)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,selectMethod)
importFrom(methods,slot)
importFrom(parallel,detectCores)
importFrom(rlang,.data)
importFrom(stats,aggregate)
importFrom(stats,binomial)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,pnorm)
importFrom(stats,quantile)
importFrom(stats,setNames)
importFrom(stats,weighted.mean)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)