.gitignore

build/
BMFMain/ProcessingSteps.c
BMFMain/Workflow.c
BMFMain/__init__.c
MawCluster/BCBam.c
MawCluster/BCFastq.c
MawCluster/BCVCF.c
MawCluster/CNAUtils.c
MawCluster/FFPE.c
MawCluster/FauxBMF.c
MawCluster/IndelUtils.c
MawCluster/MatchedPairs.c
MawCluster/PileupUtils.c
MawCluster/Probability.c
MawCluster/SNVUtils.c
MawCluster/SVUtils.c
MawCluster/TLC.c
MawCluster/VCFWriters.c
MawCluster/__init__.c
SecC/Cassandra.c
SecC/ErrMer.c
SecC/ErrMerDriver.c
SecC/ErrMer_Proto.c
SecC/SecC.c
SecC/__init__.c
test/MawClusterTest/BCFastq_test.c
utilBMF/ArgumentSketcher.c
utilBMF/ErrorHandling.c
utilBMF/GlobalReporting.c
utilBMF/HTSUtils.c
utilBMF/InferBMF.c
utilBMF/MergePairedAlignments.c
utilBMF/QC.c
utilBMF/SensSpecAndBenchmarking.c
utilBMF/Uniqueness.c
utilBMF/__init__.c
utilBMF/_bmftools_helper.c
utilBMF/cFqProc.c
utilBMF/cstring.c
Doc/*
BMFTools.egg-info/*
Bin/*