I am working with different omics datasets. Here, I am sharing some tools for the analysis of NGS, CyTOF and IMC data.
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NeuroSysMed
- Bergen
- https://www.uib.no/en/persons/Dimitrios.Kleftogiannis
Pinned Loading
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immuneReconstitution_RRMS
immuneReconstitution_RRMS PublicDescribe immune reconstitution in Multiple Sclerosis using mass cytometry data
R
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cfDNA_AnalysisPipeline
cfDNA_AnalysisPipeline PublicAnalysis of cfDNA data with UMIs (consensus generation, SNV calling, annotation and evaluation of fragment length profiles)
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singleCellClassification
singleCellClassification PublicSingle cell classification and feature engineering using DREMI scores
R 4
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duplexFiltering
duplexFiltering Publicduplex DNA molecule identification tool for ultra-sensitive SNV detection
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AmpliSolve
AmpliSolve PublicIdentification of single nucleotide variants using position-specific error estimation in deep sequencing data
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