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metadata.yaml
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about: []
access:
- schemaKey: AccessRequirements
status: dandi:OpenAccess
assetsSummary:
approach:
- name: electrophysiological approach
schemaKey: ApproachType
dataStandard:
- identifier: RRID:SCR_015242
name: Neurodata Without Borders (NWB)
schemaKey: StandardsType
measurementTechnique:
- name: analytical technique
schemaKey: MeasurementTechniqueType
- name: current clamp technique
schemaKey: MeasurementTechniqueType
- name: voltage clamp technique
schemaKey: MeasurementTechniqueType
numberOfBytes: 8073127848
numberOfCells: 210
numberOfFiles: 210
numberOfSubjects: 53
schemaKey: AssetsSummary
species:
- identifier: http://purl.obolibrary.org/obo/NCBITaxon_9606
name: Human
schemaKey: SpeciesType
- identifier: http://purl.obolibrary.org/obo/NCBITaxon_9606
name: Homo sapiens - Human
schemaKey: SpeciesType
variableMeasured:
- ProcessingModule
- VoltageClampSeries
- CurrentClampStimulusSeries
- VoltageClampStimulusSeries
- CurrentClampSeries
citation: Chartrand, Thomas; Lee, Brian; Dalley, Rachel; Lein, Ed; Kalmbach, Brian
(2023) Human L1 patch-seq electrophysiology (Version draft) [Data set]. DANDI archive.
https://dandiarchive.org/dandiset/000630/draft
contributor:
- affiliation: []
email: tom.chartrand@alleninstitute.org
identifier: 0000-0002-7093-8681
includeInCitation: true
name: Chartrand, Thomas
roleName:
- dcite:ContactPerson
- dcite:DataManager
schemaKey: Person
- affiliation: []
email: brianle@alleninstitute.org
identifier: 0000-0002-3210-5638
includeInCitation: true
name: Lee, Brian
roleName:
- dcite:ContactPerson
schemaKey: Person
- affiliation: []
email: racheld@alleninstitute.org
identifier: 0000-0001-7461-7845
includeInCitation: true
name: Dalley, Rachel
roleName:
- dcite:ProjectMember
schemaKey: Person
- affiliation: []
email: edl@alleninstitute.org
identifier: 0000-0001-9012-6552
includeInCitation: true
name: Lein, Ed
roleName:
- dcite:ProjectLeader
schemaKey: Person
- awardNumber: U01MH114812
contactPoint: []
identifier: https://ror.org/04xeg9z08
includeInCitation: false
name: National Institute of Mental Health
roleName:
- dcite:Funder
schemaKey: Organization
url: https://www.nimh.nih.gov/
- awardNumber: UM1MH130981
contactPoint: []
identifier: https://ror.org/00dcv1019
includeInCitation: false
name: Allen Institute for Brain Science
roleName: []
schemaKey: Organization
url: https://alleninstitute.org/
- affiliation: []
email: briank@alleninstitute.org
identifier: 0000-0003-3136-8097
includeInCitation: true
name: Kalmbach, Brian
roleName:
- dcite:ContactPerson
schemaKey: Person
dateCreated: '2023-09-13T20:50:35.329036+00:00'
datePublished: '2023-09-15T22:57:37.467321+00:00'
description: 'Patch-seq electrophysiology data from human neocortical L1 neurons,
accompanying the manuscript "Morpho-electric and transcriptomic divergence of the
layer 1 interneuron repertoire in human versus mouse neocortex" (https://www.biorxiv.org/content/10.1101/2022.10.24.511199).
Analysis code and extracted features available at https://github.com/AllenInstitute/patchseq_human_L1.
Feature extraction package available at https://github.com/AllenInstitute/ipfx.'
ethicsApproval: []
id: DANDI:000630/draft
identifier: DANDI:000630
keywords:
- human
- multimodal
- patch-seq
- neocortex
license:
- spdx:CC-BY-4.0
manifestLocation:
- https://api.dandiarchive.org/api/dandisets/000630/versions/draft/assets/
name: Human L1 patch-seq electrophysiology
protocol:
- https://www.protocols.io/view/patch-seq-recording-and-extraction-8epv51n45l1b/v3
publishedBy:
endDate: '2023-09-15T22:57:37.467321+00:00'
id: urn:uuid:f86b18c7-b5dd-4bf5-b18e-113c26263d20
name: DANDI publish
schemaKey: PublishActivity
startDate: '2023-09-15T22:57:37.467321+00:00'
wasAssociatedWith:
- id: urn:uuid:393c2897-46d4-43d8-82d5-dec03b33322c
identifier: RRID:SCR_017571
name: DANDI API
schemaKey: Software
version: 0.1.0
relatedResource: []
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.4
studyTarget:
- Multimodal classifcation of cell types in the human neocortex.
url: https://dandiarchive.org/dandiset/000630/draft
version: draft
wasGeneratedBy: []