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Find the k-mer profile from a multifasta file and compare it among the sequences

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kmers

Calculates the k-mer profile (for k = 4, 6 or 8) of each sequence in a multi-fasta file and performs a paired comparison between the sequences' profiles. The calculation of the z-value for each k-mer is calculated as described by Schbath in 1997. Schbath, S. (1997). An efficient statistic to detect over- and under-represented words in DNA sequences. J. Comp. Biol. 4 189-192.

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Find the k-mer profile from a multifasta file and compare it among the sequences

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