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SUPPA v2.1

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@JLTrincado JLTrincado released this 23 Mar 14:15
v2.1
9b12ab6

SUPPA isoform compatible extension. Modifications:

  1. generateEvents: has a new required argument (-f --format) which can be either ioe or ioi. If the choosen format is ioe the programs requires the at least one event type is assigned to -e (for ex: SE). The rest of the commands for this functionality works as in the previous version.
  2. diffSplice:
    • The argument --expression-files was changed to --tpm (it is more intuitive and faster to type).
    • The argument --ioe was changed to --input. This argument checks if the file has either an .ioe or .ioi file extension. If not. the programs exist with an error informing the user about this. The rest of the commands for this functionality works as in the previous version.
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