-
Notifications
You must be signed in to change notification settings - Fork 105
/
Copy path.Rbuildignore
95 lines (95 loc) · 2.34 KB
/
.Rbuildignore
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
^LICENSE\.md$
^.*\.Rproj$
^\.Rproj\.user$
^.travis.yml
^.github
^atac_cds_bge.rds
^atac_transform_models_20210927
^batch.R
^cao_l2.cluster.rds
^cao_l2.load.rds
^cao_l2.preprocess.rds
^data_sets
^documentation_needed
^examples
^examples.20211221.txt
^expr.mtx
^gap16_ref_models
^gene_module_df_dev_length.txt
^gene_module_df_unit_length.txt
^hubmap.atac-seq.w135.pancreas.s1.20210927.rds
^hubmap.atac-seq.w136.pancreas.s1.20210927.rds
^hubmap.atac-seq.w136.pancreas.s2.20210927.rds
^jennifer_mods
^mo
^module_bin2d.pdf
^module_bin2d.ps
^monocle3_objects
^monocle3.Rproj
^monocle3.test_lsi_numi_clean.txt
^monocle_objects.01
^mutant.cell_type_sub.join.csv
^mutant.cell_type_sub.join.ods
^mutant.fix_nas2.cell_type_sub.txt
^mutant.fix_nas.cell_type_sub.csv
^mutant.fix_nas.cell_type_sub.txt
^mutant.maddys.cell_type_sub.txt
^mutant.modified.cell_type_sub.txt
^mutant.orig.cell_type_sub.txt
^mutant.remodified2.cell_type_sub.txt
^mutant.remodified.cell_type_sub.txt
^my_cds_for_lsi.rds
^notes.bad_loop_ranges.20220211.txt$
^nn_dists.rcppannoy.cosine.cores_5.tbl
^nn_dists.rcppannoy.cosine.tbl
^nn_dists.rcppannoy.euclidean.cores_5.tbl
^nn_dists.rcppannoy.euclidean.tbl
^nn_idx.rcppannoy.cosine.cores_5.tbl
^nn_idx.rcppannoy.cosine.tbl
^nn_idx.rcppannoy.euclidean.cores_5.tbl
^nn_idx.rcppannoy.euclidean.tbl
^nn_short_nn_dists
^nn_short_nn_dists.bck
^nn_short_nn_idx
^nn_short_nn_idx.bck
^notes.bad_loop_ranges.20220211.txt$
^packer_embryo.load.rds
^packer_embryo.processed_new_monocle3.rds
^packer_embryo.processed_old_monocle3.rds
^packer.load.hdf5
^packer_test_identity
^pdat.txt
^rna_transform_models_20210927
^row_names_full_cds.txt
^supermodule_bin2d.pdf
^supermodule_bin2d.ps
^tests.3ab893f
^testthat_warning.txt
^tm
^transform_models.01
^transform_models.02
^transform_models.red_dim_aux.20211026
^w135.pancreas.s1_subject.pdf
^w136_pancreas_load.s1.rds
^w136.pancreas.s1_reference.pdf
^w136.pancreas.s1_subject.pdf
^w136.pancreas.s2_subject.pdf
^worm_embryo_coldata.rds
^worm_embryo_colnames.txt
^worm_embryo_expression_matrix.mtx
^worm_embryo_expression_matrix.rds
^worm_embryo_rowdata.rds
^worm_embryo_rownames.txt
^worm_embryo_variable_features.txt
^worm_l2_colnames.txt
^worm_l2_expression_matrix.mtx
^worm_l2_rownames.txt
^worm_l2_variable_features.txt
^R/NOTES
^R/nearest_neighbors.R.20211206a
^R/phoot
^R/save
^R/zzzz_old_files
^src/clustering.o
^src/monocle3.so
^src/RcppExports.o