From 5e526366dc728b87aec9255700a51c320545d32b Mon Sep 17 00:00:00 2001 From: Radovan Bast Date: Wed, 29 Jan 2025 11:32:44 +0100 Subject: [PATCH] remove left-over from my debugging through container --- content/snakemake.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/content/snakemake.md b/content/snakemake.md index 804e19c..8cc5842 100644 --- a/content/snakemake.md +++ b/content/snakemake.md @@ -21,18 +21,18 @@ This could be one way to do it: num_rounds=10 for i in $(seq -w 1 ${num_rounds}); do - ./conda.sif python generate_data.py \ + python generate_data.py \ --num-samples 2000 \ --training-data data/train_${i}.csv \ --test-data data/test_${i}.csv - ./conda.sif python generate_predictions.py \ + python generate_predictions.py \ --num-neighbors 7 \ --training-data data/train_${i}.csv \ --test-data data/test_${i}.csv --predictions results/predictions_${i}.csv - ./conda.sif python plot_results.py \ + python plot_results.py \ --training-data data/train_${i}.csv \ --predictions results/predictions_${i}.csv \ --output-chart results/chart_${i}.png @@ -51,7 +51,7 @@ For the following we will assume that we have the input data available: num_rounds=10 for i in $(seq -w 1 ${num_rounds}); do - ./conda.sif python generate_data.py \ + python generate_data.py \ --num-samples 2000 \ --training-data data/train_${i}.csv \ --test-data data/test_${i}.csv