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Releases: chrovis/cljam

Release version 0.1.6

06 Jan 09:18
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  • Sequential reading function for FASTA #16
  • Common compressor stream #17
  • Add encode/decode functions for SAM FLAG field #19
  • Fix mpileup bug
  • Improve project settings #18

Release version 0.1.5

26 Jul 06:43
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  • Add FASTQ I/O
  • Add VCF I/O
  • Improve level analyzer
  • Improve mpileup
  • Improve performance of SAM/BAM conversion
  • Fix bugs of sorter
  • Fix small bugs

Release version 0.1.4

02 Feb 07:45
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  • Add level analyzer of alignments
  • Update dependencies except clojure 1.8.0
  • Enable CI with JDK8
  • Fix bugs of sorter
  • Fix bugs of m-pileup
  • Fix small bugs

Release version 0.1.3

14 Aug 06:51
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  • Improve FASTA reading
  • Improve normalization
  • Improve pileup performance (also support concurrency)
  • Enable index command to specify the number of threads
  • Display sub-command candidates
  • Fix bugs

Release version 0.1.2

20 May 06:33
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  • Improve performance of pileup
  • Fix small bugs
  • Refactoring codes

0.1.1

25 Apr 10:40
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  • Improve performance of BAM indexing
  • Fix bugs of FASTA indexing
  • Fix bugs of sequence dictionary creation
  • Refactoring codes