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Add CRAM writer (alpha) #313

Merged
merged 10 commits into from
Jul 22, 2024

Add descriptions for arity 0 overload of data series/tag encoders

800eecf
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Merged

Add CRAM writer (alpha) #313

Add descriptions for arity 0 overload of data series/tag encoders
800eecf
Select commit
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Failed to load commit list.
Codecov / codecov/project succeeded Jul 16, 2024 in 0s

89.28% (+0.43%) compared to 3b567e8

View this Pull Request on Codecov

89.28% (+0.43%) compared to 3b567e8

Details

Codecov Report

Attention: Patch coverage is 93.96450% with 51 lines in your changes missing coverage. Please review.

Project coverage is 89.28%. Comparing base (3b567e8) to head (800eecf).

Files Patch % Lines
src/cljam/io/cram/writer.clj 90.85% 11 Missing and 4 partials ⚠️
src/cljam/io/cram/encode/structure.clj 93.65% 12 Missing and 1 partial ⚠️
src/cljam/io/cram/data_series.clj 95.25% 2 Missing and 9 partials ⚠️
src/cljam/io/cram/encode/record.clj 94.94% 3 Missing and 6 partials ⚠️
src/cljam/io/cram.clj 88.88% 1 Missing ⚠️
src/cljam/io/cram/decode/record.clj 0.00% 1 Missing ⚠️
src/cljam/io/cram/encode/alignment_stats.clj 96.87% 0 Missing and 1 partial ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##           master     #313      +/-   ##
==========================================
+ Coverage   88.85%   89.28%   +0.43%     
==========================================
  Files          93       97       +4     
  Lines        8091     8841     +750     
  Branches      465      481      +16     
==========================================
+ Hits         7189     7894     +705     
- Misses        437      466      +29     
- Partials      465      481      +16

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