Merge remote-tracking branch 'origin/master' into Haploflow-test1

Donaim · Donaim · commit c049704b2c21 · 2025-01-03T13:50:55.000-08:00
diff --git a/.github/workflows/build-and-test.yml b/.github/workflows/build-and-test.yml
@@ -61,6 +61,7 @@ jobs:
         run: coverage run --source=micall/core,micall/g2p,micall/resistance,micall/monitor -m pytest
 
       - name: Report code coverage
+        if: "!github.event.pull_request.draft"
         run: |
           rm -rf micall/tests/microtest/scratch
           codecov
@@ -124,6 +125,7 @@ jobs:
         run: python micall/main.py release_test_microtest micall.simg
 
       - name: Upload Singularity Image
+        if: github.event_name != 'pull_request'
         uses: actions/upload-artifact@v4
         with:
           name: micall.simg
diff --git a/pyproject.toml b/pyproject.toml
@@ -58,7 +58,7 @@ test = [
 ]
 dev = [
     # Dependencies required for development (linting, type checking, etc.)
-    "ruff==0.8.4",
+    "ruff==0.8.5",
     "mypy==1.14.1",
     "mypy-extensions==1.0.0",
     "gprof2dot==2024.6.6",

Original file line number	Diff line number	Diff line change
`@@ -58,7 +58,7 @@ test = [`
`58`	`58`	`]`
`59`	`59`	`dev = [`
`60`	`60`	`# Dependencies required for development (linting, type checking, etc.)`
`61`		`- "ruff==0.8.4",`
	`61`	`+ "ruff==0.8.5",`
`62`	`62`	`"mypy==1.14.1",`
`63`	`63`	`"mypy-extensions==1.0.0",`
`64`	`64`	`"gprof2dot==2024.6.6",`