_pkgdown.yml

destination: docs
url: https://caravagnalab.github.io/biPOD/
template:
  bootstrap: 5
reference:
- title: Fit data
  desc: Functions to initialize data and fit them.
- contents:
  - init
  - fit_breakpoints
  - fit
  - fit_two_pop_model
- title: Plot data
  desc: Function to visualize data and results.
- contents:
  - plot_bayes_factor
  - plot_breakpoints_posterior
  - plot_elbo
  - plot_fit
  - plot_input
  - plot_mixture_model_omega
  - plot_normalized_growth_rate_posteriors
  - plot_posterior
  - plot_posteriors
  - plot_report
  - plot_t0_posterior
  - plot_traces
  - plot_two_pop_fit
  - biPOD_ppc_dens_overlay
  - biPOD_ppc_intervals
  - biPOD_ppc_ribbon
  - print.bipod
- title: Simulate data
  desc: Function to produce synthetic data.
- contents:
  - sim_stochastic_exponential
  - sim_stochastic_logistic
- title: Data
  desc: Example dataset to perform analysis.
- contents: xenografts