diff --git a/.DS_Store b/.DS_Store new file mode 100644 index 0000000..3bb2997 Binary files /dev/null and b/.DS_Store differ diff --git a/First_notebook.ipynb b/First_notebook.ipynb index 8fb0cf2..70484b6 100644 --- a/First_notebook.ipynb +++ b/First_notebook.ipynb @@ -12,7 +12,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 25, "id": "7926639c-e08e-4d6a-ba50-3449562336a8", "metadata": { "tags": [] @@ -25,68 +25,529 @@ }, { "cell_type": "code", - "execution_count": null, - "id": "d93e136d-9159-4318-b2df-31f0ccdafa0f", + "execution_count": 26, + "id": "d87b6e11-b5c5-4531-9496-137bcbe4580d", + "metadata": {}, + "outputs": [], + "source": [ + "fv = pd.read_csv(\"showable_standard.csv\")" + ] + }, + { + "cell_type": "code", + "execution_count": 27, + "id": "5420d5a5-10a2-43d6-85d8-8e2963629fc4", "metadata": { "tags": [] }, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
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agesitegm_volwm_volcsf_volgm_icv_ratiogmwm_icv_ratiowmh_volwmh_countcbf_gm_pvc0...cov_wm_pvc0cov_wm_pvc2cov_aca_pvc0cov_mca_pvc0cov_pca_pvc0cov_aca_pvc2cov_mca_pvc2cov_pca_pvc2Additional_1Additional_2
count6.0000006.0000006.0000006.0000006.0000006.000000e+006.00006.006.06.000000e+00...6.00006.000000e+006.000000e+006.000000e+006.000000e+006.000000e+006.000000e+006.0006.0006.0000
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std19.2919830.983192408.2045330.0000000.0000006.080942e-170.00000.000.02.432377e-16...0.00002.432377e-162.432377e-162.432377e-162.432377e-162.432377e-162.432377e-160.0000.0000.0000
min29.4444001.0000000.6447940.4727320.4243534.143650e-011.12422.233.01.111100e+00...1.12341.987600e+001.111100e+001.111100e+001.111100e+001.111100e+001.111100e+001.2341.2341.1242
25%59.1865801.0000000.6517400.4727320.4243534.143650e-011.12422.233.01.111100e+00...1.12341.987600e+001.111100e+001.111100e+001.111100e+001.111100e+001.111100e+001.2341.2341.1242
50%65.6077151.5000000.6738780.4727320.4243534.143650e-011.12422.233.01.111100e+00...1.12341.987600e+001.111100e+001.111100e+001.111100e+001.111100e+001.111100e+001.2341.2341.1242
75%70.5246582.7500000.7316780.4727320.4243534.143650e-011.12422.233.01.111100e+00...1.12341.987600e+001.111100e+001.111100e+001.111100e+001.111100e+001.111100e+001.2341.2341.1242
max87.7654303.0000001000.5703840.4727320.4243534.143650e-011.12422.233.01.111100e+00...1.12341.987600e+001.111100e+001.111100e+001.111100e+001.111100e+001.111100e+001.2341.2341.1242
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8 rows × 31 columns

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" + ], + "text/plain": [ + " age site gm_vol wm_vol csf_vol gm_icv_ratio \\\n", + "count 6.000000 6.000000 6.000000 6.000000 6.000000 6.000000e+00 \n", + "mean 62.939183 1.833333 167.326373 0.472732 0.424353 4.143650e-01 \n", + "std 19.291983 0.983192 408.204533 0.000000 0.000000 6.080942e-17 \n", + "min 29.444400 1.000000 0.644794 0.472732 0.424353 4.143650e-01 \n", + "25% 59.186580 1.000000 0.651740 0.472732 0.424353 4.143650e-01 \n", + "50% 65.607715 1.500000 0.673878 0.472732 0.424353 4.143650e-01 \n", + "75% 70.524658 2.750000 0.731678 0.472732 0.424353 4.143650e-01 \n", + "max 87.765430 3.000000 1000.570384 0.472732 0.424353 4.143650e-01 \n", + "\n", + " gmwm_icv_ratio wmh_vol wmh_count cbf_gm_pvc0 ... cov_wm_pvc0 \\\n", + "count 6.0000 6.00 6.0 6.000000e+00 ... 6.0000 \n", + "mean 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "std 0.0000 0.00 0.0 2.432377e-16 ... 0.0000 \n", + "min 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "25% 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "50% 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "75% 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "max 1.1242 2.23 3.0 1.111100e+00 ... 1.1234 \n", + "\n", + " cov_wm_pvc2 cov_aca_pvc0 cov_mca_pvc0 cov_pca_pvc0 cov_aca_pvc2 \\\n", + "count 6.000000e+00 6.000000e+00 6.000000e+00 6.000000e+00 6.000000e+00 \n", + "mean 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "std 2.432377e-16 2.432377e-16 2.432377e-16 2.432377e-16 2.432377e-16 \n", + "min 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "25% 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "50% 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "75% 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "max 1.987600e+00 1.111100e+00 1.111100e+00 1.111100e+00 1.111100e+00 \n", + "\n", + " cov_mca_pvc2 cov_pca_pvc2 Additional_1 Additional_2 \n", + "count 6.000000e+00 6.000 6.000 6.0000 \n", + "mean 1.111100e+00 1.234 1.234 1.1242 \n", + "std 2.432377e-16 0.000 0.000 0.0000 \n", + "min 1.111100e+00 1.234 1.234 1.1242 \n", + "25% 1.111100e+00 1.234 1.234 1.1242 \n", + "50% 1.111100e+00 1.234 1.234 1.1242 \n", + "75% 1.111100e+00 1.234 1.234 1.1242 \n", + "max 1.111100e+00 1.234 1.234 1.1242 \n", + "\n", + "[8 rows x 31 columns]" + ] + }, + "execution_count": 29, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ - "numpy?" + "female_fv.describe()" ] }, { "cell_type": "code", - "execution_count": null, - "id": "3ab6f1e1-f524-463a-8cd8-1efd65ed9c04", + "execution_count": 30, + "id": "02657e2c-97f4-42b5-a8c0-362979a1d407", "metadata": { "tags": [] }, "outputs": [], "source": [ - "import numpy\n" + "male_fv = fv[fv.sex=='M']" ] }, { "cell_type": "code", - "execution_count": null, - "id": "7e4ded80-dd56-48ab-9134-5eb298adcdfd", + "execution_count": 31, + "id": "604e37af-41bc-4b5c-b719-fcf81f6e7ffe", "metadata": { "tags": [] }, - "outputs": [], + "outputs": [ + { + "ename": "SyntaxError", + "evalue": "invalid syntax (1368741220.py, line 1)", + "output_type": "error", + "traceback": [ + "\u001b[0;36m Cell \u001b[0;32mIn[31], line 1\u001b[0;36m\u001b[0m\n\u001b[0;31m male_fv.describe().age[]\u001b[0m\n\u001b[0m ^\u001b[0m\n\u001b[0;31mSyntaxError\u001b[0m\u001b[0;31m:\u001b[0m invalid syntax\n" + ] + } + ], "source": [ - "numpy?\n" + "male_fv.describe().age[]" ] }, { "cell_type": "code", "execution_count": null, - "id": "d87b6e11-b5c5-4531-9496-137bcbe4580d", + "id": "86373c0a-20ea-4a0e-b314-374d3aa68b85", "metadata": {}, "outputs": [], "source": [] @@ -109,7 +570,10 @@ "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.11.8" - } + }, + "toc-autonumbering": true, + "toc-showcode": false, + "toc-showmarkdowntxt": true }, "nbformat": 4, "nbformat_minor": 5 diff --git a/Untitled.ipynb b/Untitled.ipynb new file mode 100644 index 0000000..78d7e6c --- /dev/null +++ b/Untitled.ipynb @@ -0,0 +1,33 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": null, + "id": "1ef8af2d-1b96-4ee4-b2e4-d271b0ebd526", + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3 (ipykernel)", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.11.8" + } + }, + "nbformat": 4, + "nbformat_minor": 5 +} diff --git a/trainer1.ipynb b/trainer1.ipynb index d0477de..369d414 100644 --- a/trainer1.ipynb +++ b/trainer1.ipynb @@ -509,7 +509,7 @@ }, "outputs": [], "source": [ - "foundation.csv_my_excel(\"example_excel.xlsx\", \"row_key\")" + "dataframe = foundation.csv_my_excel(\"example_excel.xlsx\", \"row_key\")" ] }, { @@ -518,6 +518,28 @@ "id": "e0f6d633-f2ca-4208-a005-0fe075ceec1b", "metadata": {}, "outputs": [], + "source": [ + "dataframe" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "11a520e0-1296-40ab-bf85-95b82a16851e", + "metadata": { + "tags": [] + }, + "outputs": [], + "source": [ + "dataframe.to_csv (\"dataset1.csv\")" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "13cebb86-0a88-45e3-a0b9-6af7f980df95", + "metadata": {}, + "outputs": [], "source": [] } ],