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Poetry build#72

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Merged

CodeByDrescher merged 43 commits intodevbiosimulators/Biosimulators_test_suite:devfrom poetry-buildbiosimulators/Biosimulators_test_suite:poetry-buildCopy head branch name to clipboardSep 19, 2024

+8,121-310

Commits

Commits on Dec 16, 2022

• starting to document

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Commits on Dec 19, 2022

• More documenting

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• getting deeper now!

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Commits on Dec 20, 2022

• small change

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  901fd6f

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• hunting down differences

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Commits on Dec 21, 2022

• more documentation fixes

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Commits on Jan 9, 2023

• locked down reqs

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  b4d1e19

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• version bugfix

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Commits on Feb 9, 2023

• added hdf5 fixed string handling

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Commits on Apr 24, 2023

• upgrading minimum biosimulators utils version

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  34150b4

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• added pipfile and lock file

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Commits on Apr 25, 2023

• added pipenv lock file

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Commits on Sep 1, 2024

• Unlimiting biosimulators_utils

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  8b318f6

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• restoring lockdown

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  3e661a9

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• locking down dependencies

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• allowing earlier versions of BSU

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Commits on Sep 4, 2024

• Added pyproject.toml

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Commits on Sep 5, 2024

• updated git ignore file

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  1f10a14

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• tweaked dependencies

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  ef80fcd

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• Locked down python version & new lock file

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Commits on Sep 6, 2024

• updaing lock file

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  9f99b61

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• Attempting to get clearer error message

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Commits on Sep 17, 2024

• Added "containall" parameter to singularity

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  1869f11

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• Change relative paths to absolute

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  388cc35

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Commits on Sep 18, 2024

• Fixes to CI and syntaxes

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  cc58564

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• Temporarily removing RBA support

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  04065f7

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• Updated to use correct version of BSU

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  cd4cab0

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• Fixed bug where all simulations caused error

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  3f69ca7

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• Merge remote-tracking branch 'origin/dev' into poetry-build

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  2202817

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• Attempting to specify repository to investigate

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  b77ca4f

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• wrong env var

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  e508220

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• Attempting to narrow linting

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  0f66753

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• attempting to enforce pytest coverage

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  e2b47ed

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• attempting to solve cov problem with setuptools

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  b856324

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• Attempting to force setuptools upgrade

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  a60a2ab

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Commits on Sep 19, 2024

• Adding tmate

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  3917709

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• Fixed bug where 'id' not a key was not handled

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  bb1ac56

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• Added missing dev dependencies

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  a0c67ec

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• Forgot lock file + dependency collision

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  963b0a3

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• Fixed and added testing

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  44e48c6

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• Restoring hard-coded skip

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  8543395

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• Linting fix

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  dc1d236

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• Updating Version for Release

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