GitHub - bioinfoUQAM/slm_kgenomvir: Evaluation of Statistical Linear Models for Genome Virus Classification

Evaluation of Statistical Linear Models for K-mer-based Genome Virus Classification

This is the source code of the paper:

A. M. Remita and A. B. Diallo, "Statistical Linear Models in Virus Genomic Alignment-free Classification: Application to Hepatitis C Viruses," 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), San Diego, CA, USA, 2019, pp. 474-481, https://doi.org/10.1109/BIBM47256.2019.8983375

Name	Name	Last commit message	Last commit date
Latest commit maremita Merge pull request #1 from maremita/master Mar 24, 2021 da8d262 · Mar 24, 2021 History 14 Commits
data/viruses	data/viruses	Add some virus datasets	Mar 15, 2021
experiments	experiments	Rename package to slm_kgenomvir	Jul 17, 2020
report_scripts	report_scripts	Add scripts used for BIBM19 paper	Mar 30, 2020
slm_kgenomvir	slm_kgenomvir	Add init files to fix modules imports	Mar 6, 2021
tutorials	tutorials	Tutorial on SLM in french	Mar 15, 2021
.gitignore	.gitignore	Add bash scripts for bibm19 evaluation programs	Mar 30, 2020
LICENSE	LICENSE	Update readme and license (#1 )	Jul 17, 2020
README.md	README.md	Update readme and license (#1 )	Jul 17, 2020
requirements.txt	requirements.txt	Tutorial on SLM in french	Mar 15, 2021
setup.py	setup.py	Add init files to fix modules imports	Mar 6, 2021