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antarctic_subantarctic_asteroidea_isotopes

This repository contains short code to transform raw data of dataset Stable isotope ratios of C, N and S in Southern Ocean sea stars (1985-2017)

Dataset decription

The raw data is available at Zenodo:

DOI

Darwin Core formatted of this dataset is published in the portals below.

portal link
IPT https://ipt.biodiversity.aq/resource?r=antarctic_subantarctic_asteroidea_isotopes
GBIF https://www.gbif.org/dataset/ff3984d7-84bd-4f3a-b843-666faa4c1696
OBIS https://obis.org/dataset/c6b9cd54-3c38-4054-b5e6-d331414d5899

Repo structure

.
├── README.md 			: description of this repository
├── SO_isotopes.Rproj	        : R Project
├── data			: directory to store data
│   └── processed		: directory to store processed data
├── html			: HTML of knitted Rmd files
│   └── transform-data.html	
├── renv 			: renv files for dependencies
├── renv.lock			: describe the state of project's library
└── src
    └── transform-data.Rmd	       : Rmarkdown file of the code

Knitted Rmarkdown can be rendered at https://raw.githack.com/biodiversity-aq/antarctic_subantarctic_asteroidea_isotopes/main/html/transform-data.html

Getting started

If dependencies are not automatically installed by renv when you open SO_isotopes.Rproj, try the following command.

renv::restore()

You can run chunks of R code in transform-data.Rmd or knit them into html.

About

Script used to transform the dataset into Darwin Core format

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