From bec3d07fdafc8bae286b1bff958991e994afdbff Mon Sep 17 00:00:00 2001 From: Marek Gierlinski Date: Tue, 6 Sep 2022 13:51:37 +0100 Subject: [PATCH] testthat now checks factor vs character column, need to update --- tests/testthat/test_makePeptideTable.R | 1 + 1 file changed, 1 insertion(+) diff --git a/tests/testthat/test_makePeptideTable.R b/tests/testthat/test_makePeptideTable.R index 03ded57..14c51d3 100644 --- a/tests/testthat/test_makePeptideTable.R +++ b/tests/testthat/test_makePeptideTable.R @@ -30,6 +30,7 @@ meta <- read.table("../testdata/data_makePeptide_meta.txt", header=TRUE, sep="\t # make sure even if levels order is not correct, makePeptideTable sorts this out: meta.ordered <- meta meta.ordered$sample <- factor(meta.ordered$sample, levels=meta.ordered$sample) +meta.ordered$condition <- factor(meta.ordered$condition) context("Casting evidence into peptide table")