NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(summary,proteusData)
export(aggregateHifly)
export(aggregateMedian)
export(aggregateSum)
export(allowedUniProtColumns)
export(annotateProteins)
export(evidenceColumns)
export(fetchFromUniProt)
export(goodData)
export(intensityStats)
export(jaccardSimilarity)
export(limmaDE)
export(limmaRatioDE)
export(makePeptideTable)
export(makeProteinTable)
export(measureColumns)
export(normalizeData)
export(normalizeMedian)
export(normalizeTMT)
export(plotClustering)
export(plotCount)
export(plotDetectionSimilarity)
export(plotDistanceMatrix)
export(plotFID)
export(plotFID_live)
export(plotIntensities)
export(plotMV)
export(plotPCA)
export(plotPdist)
export(plotProtPeptides)
export(plotSampleDistributions)
export(plotVolcano)
export(plotVolcano_live)
export(proteinColumns)
export(readColumnNames)
export(readEvidenceFile)
export(readProteinGroups)
import(ggplot2)
import(graphics)
import(methods)
import(parallel)
import(shiny)
import(stats)
import(utils)
import(viridis)