added config files

cobaya_interface/lyaxlya.ini

@@ -0,0 +1,51 @@
+# File written on 2024-10-28 08:41:44.021037 
+# Vega git hash: dbd3b07427078fafe204a83714a5299aeb478d47 
+
+[data]
+name = lyaxlya
+tracer1 = LYA
+tracer2 = LYA
+tracer1-type = continuous
+tracer2-type = continuous
+filename = /global/cfs/cdirs/desicollab/science/lya/mock_analysis/develop/ifae-ql/qq_desi_y3/v1.0.5/analysis-1/jura-124/baseline/correlations/cf_lya_lya_0_10-exp.fits.gz
+distortion-file = /global/cfs/cdirs/desi/science/lya/mock_analysis/develop/ifae-ql/qq_desi_y3/v1.0.5/analysis-1/jura-124/baseline/correlations/dmat_lya_lya_0_10.fits
+weights-tracer1 = /global/cfs/cdirs/desicollab/science/lya/mock_analysis/develop/ifae-ql/qq_desi_y3/v1.0.5/analysis-1/jura-124/baseline/deltas_lya/Log/delta_attributes.fits.gz
+weights-tracer2 = /global/cfs/cdirs/desicollab/science/lya/mock_analysis/develop/ifae-ql/qq_desi_y3/v1.0.5/analysis-1/jura-124/baseline/deltas_lya/Log/delta_attributes.fits.gz
+
+[cuts]
+rp-min = -200.
+rp-max = +200.
+rt-min = 0
+rt-max = 200.
+r-min = 10.0
+r-max = 180.0
+mu-min = -1.
+mu-max = +1.
+
+[model]
+z evol LYA = bias_vs_z_std
+use_metal_autos = True
+model-hcd = Rogers2018
+fast_metals = True
+new_metals = True
+fullshape smoothing = gauss
+
+[metals]
+filename = None
+z evol = bias_vs_z_std
+in tracer1 = SiII(1260) SiIII(1207) SiII(1193) SiII(1190)
+in tracer2 = SiII(1260) SiIII(1207) SiII(1193) SiII(1190)
+fullshape smoothing = gauss
+
+[metal-matrix]
+rebin_factor = 3
+alpha_LYA = 2.9
+alpha_SiII(1260) = 1.
+alpha_SiIII(1207) = 1.
+alpha_SiII(1193) = 1.
+alpha_SiII(1190) = 1.
+alpha_CIV(eff) = 1.
+z_ref_objects = 2.25
+z_evol_objects = 1.44
+z_bins_objects = 1000
+

cobaya_interface/main.ini

@@ -0,0 +1,89 @@
+# File written on 2024-10-28 08:41:50.854842 
+# Vega git hash: dbd3b07427078fafe204a83714a5299aeb478d47 
+
+[data sets]
+zeff = 2.2939966572771913
+ini files = /global/homes/w/wmturner/repos/vega/cobaya_interface/lyaxlya.ini
+#global-cov-file = /global/cfs/cdirs/desicollab/science/lya/mock_analysis/develop/ifae-ql/qq_desi_y3/v1.0.5/analysis-1/jura-124/baseline/correlations/full_cov_smooth.fits
+
+[cosmo-fit type]
+cosmo fit func = ap_at
+full-shape = False
+full-shape-alpha = False
+smooth-scaling = False
+
+[fiducial]
+filename = PlanckDR12/PlanckDR12.fits
+
+[output]
+filename = /global/homes/w/wmturner/repos/vega/cobaya_interface/fits/lyaxlya
+
+[sample]
+ap = True
+at = True
+bias_LYA = True
+beta_LYA = True
+bias_QSO = True
+par_sigma_smooth = True
+per_sigma_smooth = True
+sigma_velo_disp_gauss_QSO = True
+drp_QSO = True
+bias_hcd = True
+beta_hcd = True
+L0_hcd = True
+bias_SiII(1190) = True
+bias_SiII(1193) = True
+bias_SiIII(1207) = True
+bias_SiII(1260) = True
+sigmaNL_per = True
+sigmaNL_par = True
+
+[priors]
+beta_hcd = gaussian 0.5 0.09
+
+[parameters]
+ap = 1.0
+at = 1.0
+sigmaNL_per = 3.24
+sigmaNL_par = 6.36984
+bao_amp = 1.
+bias_LYA = -0.1126854325380601
+beta_LYA = 1.67
+alpha_LYA = 2.9
+bias_QSO = 3.7222084817558145
+bias_eta_QSO = 1
+growth_rate = 0.9664323609784082
+alpha_QSO = 1.44
+bias_hcd = -0.05
+beta_hcd = 0.7
+L0_hcd = 6.5
+drp_QSO = 0.0
+sigma_velo_disp_gauss_QSO = 7.
+bias_SiII(1260) = -0.0046
+beta_SiII(1260) = 0.5
+alpha_SiII(1260) = 1.
+bias_SiIII(1207) = -0.0074
+beta_SiIII(1207) = 0.5
+alpha_SiIII(1207) = 1.
+bias_SiII(1193) = -0.0024
+beta_SiII(1193) = 0.5
+alpha_SiII(1193) = 1.
+bias_SiII(1190) = -0.0052
+beta_SiII(1190) = 0.5
+alpha_SiII(1190) = 1.
+par_sigma_smooth = 2.
+per_sigma_smooth = 2.
+
+[control]
+run_sampler = True
+sampler = Polychord
+use_template_growth_rate = False
+
+[Polychord]
+path = /global/homes/w/wmturner/repos/vega/cobaya_interface/fits/output_sampler
+name = lyaxlya
+num_live = 192
+num_repeats = 18
+do_clustering = True
+boost_posterior = 0
+