NAMESPACE

# Generated by roxygen2: do not edit by hand

export(add_midparent_expression)
export(add_size_factors)
export(expression_partitioning)
export(get_deg_counts)
export(get_deg_list)
export(ora)
export(pca_plot)
export(plot_expression_partitions)
export(plot_expression_triangle)
export(plot_partition_frequencies)
export(plot_samplecor)
importFrom(BiocParallel,bplapply)
importFrom(ComplexHeatmap,pheatmap)
importFrom(DESeq2,DESeqDataSet)
importFrom(DESeq2,estimateSizeFactors)
importFrom(DESeq2,sizeFactors)
importFrom(DESeq2,varianceStabilizingTransformation)
importFrom(RColorBrewer,brewer.pal)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(ggplot2,aes)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_curve)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,unit)
importFrom(ggplot2,ylim)
importFrom(grDevices,colorRampPalette)
importFrom(methods,as)
importFrom(patchwork,wrap_plots)
importFrom(rlang,.data)
importFrom(stats,as.formula)
importFrom(stats,cor)
importFrom(stats,p.adjust)
importFrom(stats,phyper)
importFrom(stats,prcomp)
importFrom(stats,setNames)
importFrom(stats,var)