python/scripts/run_dicom_archive_validation.py (implement automated tests)

[cmadjar]

Write automatic tests for:

• run run_dicom_archive_validation.py -p database_config.py -t <TARCHIVE PATH>
  => should return [ERROR ] argument --upload_id is required and the script help details
  => should return ERROR CODE 3 (MISSING_ARG)
• run run_dicom_archive_validation.py -p database_config.py -u <UPLOADID>
  => should return [ERROR ] argument --tarchive_path is required and the script help details
  => should return ERROR CODE 3 (MISSING_ARG)
• run un_dicom_archive_validation.py -z
  => should return [ERROR ] -z is not a valid option for the script
  => should return ERROR CODE 6 (INVALID_ARG)
• run run_dicom_archive_validation.py -p database_config.py -t <INVALID PATH> -u <VALID UPLOADID>
  => should return [ERROR ] <INVALID PATH> does not exist. Please provide a valid path for --tarchive_path
  => should return ERROR CODE 5 (INVALID_PATH)
• run run_dicom_archive_validation.py -p database_config.py -u <UPLOADID> -t <TARCHIVE PATH> using inexistant upload ID and random tarchive path
  => should return [ERROR ] Did not find an entry in mri_upload associated with 'UploadID' 16666
  => should return ERROR CODE 23 (SELECT_FAILURE)
• run run_dicom_archive_validation.py -p database_config.py -u <UPLOADID> -t <TARCHIVE PATH> using valid upload ID and a valid tarchive path but wrong combination of upload ID and tarchive path (a.k.a. tarchive path not corresponding to the tarchive linked to the upload ID)
  => should return [ERROR ] UploadID <UPLOAD ID> and ArchiveLocation <TARCHIVE PATH> do not refer to the same upload
  => should return ERROR CODE 23 (SELECT_FAILURE)
• run run_dicom_archive_validation.py -p database_config.py -u <UPLOADID> -t <TARCHIVE PATH> using valid upload ID, tarchive path and valid combination of upload ID and tarchive path
  => run smoothly and update fields IsTarchiveValidated and IsCandidateInfoValidated to 1 in the mri_upload table for the Upload ID that has been run.
  => should return ERROR CODE 0 (SUCCESS)

Manual checks:

• run run_dicom_archive_validation.py -h
  => should print the help of the script. Make sure the help documentation is up to date.

Issues found