fix: user-suffix?nstruct-suffix #142

	name: Bare Test with Rosetta Container Node

	on:
	push:
	branches: [main]
	pull_request:
	branches: [main]
	release:
	types: [created]
	workflow_dispatch:

	env:
	GITHUB_CONTAINER_ROSETTA_TEST: "YES" # Github Actions: run python against container node
	GITHUB_ROSETTA_TEST: "YES" # skip some integration tests

	jobs:
	RosettaTests:
	strategy:
	fail-fast: false
	matrix:
	os:
	- ubuntu-latest

	runs-on: ${{ matrix.os }}

	defaults:
	run:
	shell: bash -el {0}

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: ${{ github.ref != 'refs/heads/main' }}

	steps:
	- name: Checkout Repository
	uses: actions/checkout@v4

	- name: Setup Python
	uses: actions/setup-python@v5
	with:
	python-version: 3.11

	- name: Setup Dependency on Ubuntu
	if: matrix.os == 'ubuntu-latest'
	run: \|
	sudo apt-get update -y
	sudo apt-get install -y build-essential gnupg2 git
	sudo bash scripts/upgrade_git.sh

	- name: Verify Docker Version and Pull Rosetta Image
	run: \|
	docker --version
	docker pull --platform=linux/amd64 rosettacommons/rosetta:mpi

	- name: Setup RosettaPy on ${{ matrix.os }}
	run: \|
	pip install '.[test]' -U

	- name: Run test cases
	run: \|
	pytest tests/ -m 'integration'

	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v5
	with:
	files: ./coverage.xml
	fail_ci_if_error: false
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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