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DESCRIPTION
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Package: MRAPSS
Title: The MRAPSS package implement the MR-APPSS approach to test for the causal effect of an exposure on a outcome disease.
Version: 0.0.0.9000
Authors@R:
person(given = "Xianghong",
family = "HU",
role = c("aut", "cre"),
email = "maxhu@ust.hk",
comment = c(ORCID = "0000-0001-5260-3936"))
Description: The MRAPSS package implement the MR-APPSS approach to test for the causal effects between an exposure and a outcome disease.
The MR-APPSS is a unified approach to Mendelian Randomization accounting for polygenicity, pleiotropy and sample structure using genome-wide summary statistics.
Specifically, MR-APPSS uses a background-foreground model to characterize both SNP-exposure effects and SNP-outcome effects estimates, where the background model accounts for confounding from genetic correlation and sample structure and the foreground model captures the valid signal for causal inference.
License: What license it uses
Encoding: UTF-8
LazyData: true
Imports:
ggplot2,
ggnewscale,
dplyr,
magrittr,
ieugwasr (>= 0.1.4),
readr,
expm
Remotes:
mrcieu/ieugwasr
RoxygenNote: 7.0.2
Depends:
R (>= 2.10)
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr