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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(DE)
export(abod_analysis)
export(comparison)
export(dbscan_analysis)
export(filter)
export(isofor_analysis)
export(normalization)
export(pca_analysis)
export(pca_save)
export(plot_list_save)
export(read_parameter_file)
export(som_analysis)
export(tsne_analysis)
export(write_parameter_file)
importFrom(Rtsne,Rtsne)
importFrom(abodOutlier,abod)
importFrom(ade4,dudi.pca)
importFrom(cowplot,plot_grid)
importFrom(data.table,":=")
importFrom(data.table,as.data.table)
importFrom(data.table,melt)
importFrom(data.table,rbindlist)
importFrom(data.table,setDT)
importFrom(dbscan,dbscan)
importFrom(dbscan,kNN)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,cpm)
importFrom(edgeR,estimateGLMCommonDisp)
importFrom(edgeR,estimateGLMTagwiseDisp)
importFrom(edgeR,estimateGLMTrendedDisp)
importFrom(edgeR,glmFit)
importFrom(edgeR,glmLRT)
importFrom(ggforce,geom_circle)
importFrom(ggplot2,aes)
importFrom(ggplot2,arrow)
importFrom(ggplot2,coord_fixed)
importFrom(ggplot2,coord_polar)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_label)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,is.ggplot)
importFrom(ggplot2,qplot)
importFrom(ggplot2,scale_color_discrete)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_gray)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggrepel,geom_text_repel)
importFrom(isofor,iForest)
importFrom(jsonlite,read_json)
importFrom(jsonlite,write_json)
importFrom(kohonen,getCodes)
importFrom(kohonen,object.distances)
importFrom(kohonen,som)
importFrom(kohonen,somgrid)
importFrom(kohonen,unit.distances)
importFrom(limma,plotMDS)
importFrom(magrittr,"%>%")
importFrom(purrr,compact)
importFrom(purrr,map)
importFrom(purrr,map_lgl)
importFrom(purrr,pwalk)
importFrom(purrr,transpose)
importFrom(stats,model.matrix)