GitHub - ValentinaPeona/RADtools: Tools for analysis of RAD Sequencing data

This branch is up to date with johnomics/RADtools:master.

Name	Name	Last commit message	Last commit date
Latest commit johnomics 1.2.4 Update man comments for new features Feb 7, 2012 a814a6b · Feb 7, 2012 History 37 Commits
t	t	1.2.4 Add P2 MIDs and IUPAC codes to restriction enyzmes	Feb 7, 2012
CHANGELOG	CHANGELOG	1.2.4 Add P2 MIDs and IUPAC codes to restriction enyzmes	Feb 7, 2012
LICENCE	LICENCE	1.2.1: Replace expected tags with cluster distance option in RADtags,…	May 15, 2011
RADMIDs	RADMIDs	Version 1.0	Aug 25, 2010
RADmanual.pdf	RADmanual.pdf	1.2.4 Add P2 MIDs and IUPAC codes to restriction enyzmes	Feb 7, 2012
RADmanual.tex	RADmanual.tex	1.2.4 Add P2 MIDs and IUPAC codes to restriction enyzmes	Feb 7, 2012
RADmarkers	RADmarkers	1.2.1 Minor documentation/output changes	May 16, 2011
RADpools	RADpools	1.2.4 Update man comments for new features	Feb 7, 2012
RADtags	RADtags	1.2.4 Update man comments for new features	Feb 7, 2012
RADtools.pm	RADtools.pm	1.2.1 Minor documentation/output changes	May 16, 2011
README	README	1.2.4 Add P2 MIDs and IUPAC codes to restriction enyzmes	Feb 7, 2012

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RADtools
Version 1.2.4
7 February 2012
John Davey john.davey@ed.ac.uk

Tools for processing RAD Sequencing Illumina reads. See RADmanual for more details.

Installation: Requires Perl 5.10 and CPAN module Parallel::ForkManager. No compilation required. Add RADtools.pm directory to @INC.

Citation: Baxter SW, Davey JW, Johnston JS, Shelton AM, Heckel DG, Jiggins CD, Blaxter ML (2011). 
          Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism.
          PLoS ONE 6(4):e19315.
Wiki: https://www.wiki.ed.ac.uk/display/RADSequencing/
Mailing list: rad-sequencing@jiscmail.ac.uk
github: git://github.com/johnomics/RADtools.git