MNT: Add config for isort and run on code

This matches our previous configuration as closely as possible. Most of
the changes here either compress some lines or pick up a few imports
that weren't quite right.

docs/conf.py

@@ -16,7 +16,6 @@
 
 import metpy
 
-
 # If extensions (or modules to document with autodoc) are in another directory,
 # add these directories to sys.path here. If the directory is relative to the
 # documentation root, use resolve() to make it absolute, like shown here.

docs/override_check.py

@@ -8,7 +8,6 @@
 from pathlib import Path
 import sys
 
-
 modules_to_skip = ['metpy.xarray']
 
 

examples/plots/Simple_Sounding.py

@@ -17,7 +17,6 @@
 from metpy.plots import add_metpy_logo, SkewT
 from metpy.units import units
 
-
 ###########################################
 
 # Change default to be better for skew-T

examples/plots/Station_Plot_with_Layout.py

@@ -24,8 +24,8 @@
 
 from metpy.calc import wind_components
 from metpy.cbook import get_test_data
-from metpy.plots import (add_metpy_logo, simple_layout, StationPlot,
-                         StationPlotLayout, wx_code_map)
+from metpy.plots import (add_metpy_logo, simple_layout, StationPlot, StationPlotLayout,
+                         wx_code_map)
 from metpy.units import units
 
 ###########################################

examples/plots/upperair_declarative.py

@@ -19,7 +19,6 @@
 import metpy.plots as mpplots
 from metpy.units import units
 
-
 ########################################
 # **Getting the data**
 #

pyproject.toml

@@ -4,3 +4,15 @@ build-backend = "setuptools.build_meta"
 
 [tool.setuptools_scm]
 version_scheme = "post-release"
+
+[tool.isort]
+line_length = 95
+known_first_party = ["metpy", "flake8_metpy"]
+force_single_line = false
+reverse_relative = true
+use_parentheses = true
+force_sort_within_sections = true
+order_by_type = false
+sort_relative_in_force_sorted_sections = true
+combine_as_imports = true
+combine_star = true

src/metpy/__init__.py

@@ -33,5 +33,6 @@
 
 from ._version import get_version  # noqa: E402
 from .xarray import *  # noqa: F401, F403, E402
+
 __version__ = get_version()
 del get_version

src/metpy/_version.py

@@ -16,9 +16,9 @@ def get_version():
                            version_scheme='post-release')
     except (ImportError, LookupError):
         try:
-            from importlib.metadata import version, PackageNotFoundError
+            from importlib.metadata import PackageNotFoundError, version
         except ImportError:  # Can remove when we require Python > 3.7
-            from importlib_metadata import version, PackageNotFoundError
+            from importlib_metadata import PackageNotFoundError, version
 
         try:
             return version(__package__)

src/metpy/calc/tools.py

@@ -338,6 +338,7 @@ def _get_bound_pressure_height(pressure, bound, height=None, interpolate=True):
     """
     # avoid circular import if basic.py ever imports something from tools.py
     from .basic import height_to_pressure_std, pressure_to_height_std
+
     # Make sure pressure is monotonically decreasing
     sort_inds = np.argsort(pressure)[::-1]
     pressure = pressure[sort_inds]

src/metpy/interpolate/grid.py

@@ -342,6 +342,7 @@ def interpolate_to_isosurface(level_var, interp_var, level, bottom_up_search=Tru
 
     """
     from ..calc import find_bounding_indices
+
     # Find index values above and below desired interpolated surface value
     above, below, good = find_bounding_indices(level_var, [level], axis=0,
                                                from_below=bottom_up_search)

src/metpy/plots/_mpl.py

@@ -4,17 +4,17 @@
 """Functionality that we have upstreamed or will upstream into matplotlib."""
 
 # See if we should monkey-patch Barbs for better pivot
+from matplotlib.axes import Axes  # noqa: E402, I100, I202
 import matplotlib.transforms as transforms
 import numpy as np
 
 # See if we need to patch in our own scattertext implementation
-from matplotlib.axes import Axes  # noqa: E402, I100, I202
 if not hasattr(Axes, 'scattertext'):
-    import matplotlib.cbook as cbook
-    import matplotlib.transforms as mtransforms
     from matplotlib import rcParams
     from matplotlib.artist import allow_rasterization
+    import matplotlib.cbook as cbook
     from matplotlib.text import Text
+    import matplotlib.transforms as mtransforms
 
     def scattertext(self, x, y, texts, loc=(0, 0), **kw):
         """Add text to the axes.

src/metpy/plots/cartopy_utils.py

@@ -24,6 +24,7 @@ def __init__(self, name, scale, **kwargs):
         def geometries(self):
             """Return an iterator of (shapely) geometries for this feature."""
             import cartopy.io.shapereader as shapereader
+
             # Ensure that the associated files are in the cache
             fname = f'{self.name}_{self.scaler.scale}'
             for extension in ['.dbf', '.shx']:

src/metpy/plots/declarative.py

@@ -14,8 +14,7 @@
 from traitlets import (Any, Bool, Float, HasTraits, Instance, Int, List, observe, TraitError,
                        Tuple, Unicode, Union, validate)
 
-from . import ctables
-from . import wx_symbols
+from . import ctables, wx_symbols
 from .cartopy_utils import import_cartopy
 from .station_plot import StationPlot
 from ..calc import reduce_point_density
@@ -483,6 +482,7 @@ def lookup_projection(projection_code):
 def lookup_map_feature(feature_name):
     """Get a Cartopy map feature based on a name."""
     import cartopy.feature as cfeature
+
     from . import cartopy_utils
 
     name = feature_name.upper()

src/metpy/plots/wx_symbols.py

@@ -7,8 +7,8 @@
 """
 
 try:
-    from importlib.resources import (files as importlib_resources_files,
-                                     as_file as importlib_resources_as_file)
+    from importlib.resources import (as_file as importlib_resources_as_file,
+                                     files as importlib_resources_files)
 except ImportError:  # Can remove when we require Python > 3.8
     from importlib_resources import (files as importlib_resources_files,
                                      as_file as importlib_resources_as_file)

src/metpy/testing.py

@@ -16,9 +16,9 @@
 import pytest
 import xarray as xr
 
-from metpy.calc import wind_components
-from metpy.cbook import get_test_data
-from metpy.deprecation import MetpyDeprecationWarning
+from .calc import wind_components
+from .cbook import get_test_data
+from .deprecation import MetpyDeprecationWarning
 from .units import units
 
 

tests/calc/test_basic.py

@@ -15,7 +15,7 @@
                         pressure_to_height_std, sigma_to_pressure, smooth_circular,
                         smooth_gaussian, smooth_n_point, smooth_rectangular, smooth_window,
                         wind_components, wind_direction, wind_speed, windchill)
-from metpy.testing import (assert_almost_equal, assert_array_almost_equal, assert_array_equal)
+from metpy.testing import assert_almost_equal, assert_array_almost_equal, assert_array_equal
 from metpy.units import units
 
 

tests/calc/test_calc_tools.py

@@ -13,19 +13,18 @@
 import xarray as xr
 
 from metpy.calc import (angle_to_direction, find_bounding_indices, find_intersections,
-                        first_derivative, get_layer, get_layer_heights, gradient,
-                        laplacian, lat_lon_grid_deltas, nearest_intersection_idx, parse_angle,
+                        first_derivative, get_layer, get_layer_heights, gradient, laplacian,
+                        lat_lon_grid_deltas, nearest_intersection_idx, parse_angle,
                         pressure_to_height_std, reduce_point_density, resample_nn_1d,
                         second_derivative)
 from metpy.calc.tools import (_delete_masked_points, _get_bound_pressure_height,
                               _greater_or_close, _less_or_close, _next_non_masked_element,
                               _remove_nans, azimuth_range_to_lat_lon, BASE_DEGREE_MULTIPLIER,
                               DIR_STRS, UND)
-from metpy.testing import (assert_almost_equal, assert_array_almost_equal, assert_array_equal)
+from metpy.testing import assert_almost_equal, assert_array_almost_equal, assert_array_equal
 from metpy.units import units
 from metpy.xarray import grid_deltas_from_dataarray
 
-
 FULL_CIRCLE_DEGREES = np.arange(0, 360, BASE_DEGREE_MULTIPLIER.m) * units.degree
 
 

tests/calc/test_cross_sections.py

@@ -9,8 +9,7 @@
 
 from metpy.calc import (absolute_momentum, cross_section_components, normal_component,
                         tangential_component, unit_vectors_from_cross_section)
-from metpy.calc.cross_sections import (distances_from_cross_section,
-                                       latitude_from_cross_section)
+from metpy.calc.cross_sections import distances_from_cross_section, latitude_from_cross_section
 from metpy.cbook import get_test_data
 from metpy.interpolate import cross_section
 from metpy.testing import assert_array_almost_equal, assert_xarray_allclose, needs_cartopy

tests/calc/test_indices.py

@@ -10,8 +10,8 @@
 import xarray as xr
 
 from metpy.calc import (bulk_shear, bunkers_storm_motion, critical_angle,
-                        mean_pressure_weighted, precipitable_water,
-                        significant_tornado, supercell_composite)
+                        mean_pressure_weighted, precipitable_water, significant_tornado,
+                        supercell_composite)
 from metpy.testing import assert_almost_equal, assert_array_almost_equal, get_upper_air_data
 from metpy.units import concatenate, units
 

tests/calc/test_kinematics.py

@@ -7,13 +7,13 @@
 import pytest
 import xarray as xr
 
-from metpy.calc import (absolute_vorticity, advection, ageostrophic_wind,
-                        divergence, frontogenesis, geostrophic_wind, inertial_advective_wind,
-                        lat_lon_grid_deltas, montgomery_streamfunction,
-                        potential_temperature, potential_vorticity_baroclinic,
-                        potential_vorticity_barotropic, q_vector, shearing_deformation,
-                        static_stability, storm_relative_helicity, stretching_deformation,
-                        total_deformation, vorticity, wind_components)
+from metpy.calc import (absolute_vorticity, advection, ageostrophic_wind, divergence,
+                        frontogenesis, geostrophic_wind, inertial_advective_wind,
+                        lat_lon_grid_deltas, montgomery_streamfunction, potential_temperature,
+                        potential_vorticity_baroclinic, potential_vorticity_barotropic,
+                        q_vector, shearing_deformation, static_stability,
+                        storm_relative_helicity, stretching_deformation, total_deformation,
+                        vorticity, wind_components)
 from metpy.constants import g, Re
 from metpy.testing import (assert_almost_equal, assert_array_almost_equal, assert_array_equal,
                            get_test_data)

tests/calc/test_thermo.py

@@ -15,22 +15,18 @@
                         isentropic_interpolation_as_dataset, lcl, lfc, lifted_index,
                         mixed_layer, mixed_layer_cape_cin, mixed_parcel, mixing_ratio,
                         mixing_ratio_from_relative_humidity,
-                        mixing_ratio_from_specific_humidity, moist_lapse,
-                        moist_static_energy, most_unstable_cape_cin, most_unstable_parcel,
-                        parcel_profile, parcel_profile_with_lcl,
-                        parcel_profile_with_lcl_as_dataset, potential_temperature,
-                        psychrometric_vapor_pressure_wet,
-                        relative_humidity_from_dewpoint,
-                        relative_humidity_from_mixing_ratio,
+                        mixing_ratio_from_specific_humidity, moist_lapse, moist_static_energy,
+                        most_unstable_cape_cin, most_unstable_parcel, parcel_profile,
+                        parcel_profile_with_lcl, parcel_profile_with_lcl_as_dataset,
+                        potential_temperature, psychrometric_vapor_pressure_wet,
+                        relative_humidity_from_dewpoint, relative_humidity_from_mixing_ratio,
                         relative_humidity_from_specific_humidity,
                         relative_humidity_wet_psychrometric,
-                        saturation_equivalent_potential_temperature,
-                        saturation_mixing_ratio,
+                        saturation_equivalent_potential_temperature, saturation_mixing_ratio,
                         saturation_vapor_pressure, showalter_index,
-                        specific_humidity_from_dewpoint,
-                        specific_humidity_from_mixing_ratio, static_stability,
-                        surface_based_cape_cin, temperature_from_potential_temperature,
-                        thickness_hydrostatic,
+                        specific_humidity_from_dewpoint, specific_humidity_from_mixing_ratio,
+                        static_stability, surface_based_cape_cin,
+                        temperature_from_potential_temperature, thickness_hydrostatic,
                         thickness_hydrostatic_from_relative_humidity, vapor_pressure,
                         vertical_velocity, vertical_velocity_pressure,
                         virtual_potential_temperature, virtual_temperature,

tests/interpolate/test_interpolate_tools.py

@@ -10,8 +10,7 @@
 import pytest
 
 from metpy.interpolate import (interpolate_to_grid, remove_nan_observations,
-                               remove_observations_below_value,
-                               remove_repeat_coordinates)
+                               remove_observations_below_value, remove_repeat_coordinates)
 from metpy.interpolate.tools import barnes_weights, calc_kappa, cressman_weights
 
 

tests/interpolate/test_points.py

@@ -15,8 +15,7 @@
 from metpy.interpolate import (interpolate_to_points, inverse_distance_to_points,
                                natural_neighbor_to_points)
 from metpy.interpolate.geometry import dist_2, find_natural_neighbors
-from metpy.interpolate.points import (barnes_point, cressman_point,
-                                      natural_neighbor_point)
+from metpy.interpolate.points import barnes_point, cressman_point, natural_neighbor_point
 
 logging.getLogger('metpy.interpolate.points').setLevel(logging.ERROR)
 

tests/plots/test_cartopy_utils.py

@@ -73,6 +73,7 @@ def test_us_states_scales(ccrs):
 def test_cartopy_stub(monkeypatch):
     """Test that the CartoPy stub will issue an error if CartoPy is not present."""
     import sys
+
     # This makes sure that cartopy is not found
     monkeypatch.setitem(sys.modules, 'cartopy.crs', None)
 

tests/plots/test_declarative.py

@@ -22,7 +22,6 @@
 from metpy.testing import needs_cartopy
 from metpy.units import units
 
-
 MPL_VERSION = matplotlib.__version__[:3]
 
 

tests/plots/test_skewt.py

@@ -12,7 +12,6 @@
 from metpy.plots import Hodograph, SkewT
 from metpy.units import units
 
-
 MPL_VERSION = matplotlib.__version__[:3]
 
 

tests/plots/test_station_plot.py

@@ -9,11 +9,10 @@
 import pandas as pd
 import pytest
 
-from metpy.plots import (current_weather, high_clouds, nws_layout, simple_layout,
-                         sky_cover, StationPlot, StationPlotLayout)
+from metpy.plots import (current_weather, high_clouds, nws_layout, simple_layout, sky_cover,
+                         StationPlot, StationPlotLayout)
 from metpy.units import units
 
-
 MPL_VERSION = matplotlib.__version__[:3]
 
 

tests/test_xarray.py

@@ -14,14 +14,9 @@
 from metpy.testing import (assert_almost_equal, assert_array_almost_equal, assert_array_equal,
                            get_test_data)
 from metpy.units import DimensionalityError, units
-from metpy.xarray import (
-    add_grid_arguments_from_xarray,
-    add_vertical_dim_from_xarray,
-    check_axis,
-    check_matching_coordinates,
-    grid_deltas_from_dataarray,
-    preprocess_and_wrap
-)
+from metpy.xarray import (add_grid_arguments_from_xarray, add_vertical_dim_from_xarray,
+                          check_axis, check_matching_coordinates, grid_deltas_from_dataarray,
+                          preprocess_and_wrap)
 
 
 @pytest.fixture

tests/units/test_units.py

@@ -8,8 +8,8 @@
 import pandas as pd
 import pytest
 
-from metpy.testing import assert_array_almost_equal, assert_array_equal
-from metpy.testing import assert_nan
+from metpy.testing import (assert_array_almost_equal, assert_array_equal,  # noqa: F401
+                           assert_nan)
 from metpy.units import check_units, concatenate, pandas_dataframe_to_unit_arrays, units