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gen_fault_code_openAPS.py
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import os
import numpy as np
import random
# def gen_add_code(trigger, trigger_time, variable, stuck_value):
# code = 'if %s>=%s:'%(trigger,trigger_time)
# l = '//%s+=%s' % (variable,stuck_value)
# code = code + l
# return code
# def gen_sub_code(trigger, trigger_time, variable, stuck_value):
# code = '//if %s>=%s:'%(trigger,trigger_time)
# l = '//%s-=%s' % (variable,stuck_value)
# code = code + l
# return code
def gen_stuck_code(trigger, trigger_time, variable, stuck_value):
code = 'if %s>=%s:'%(trigger,trigger_time)
l = '//%s=%s' % (variable,stuck_value)
code = code + l
return code
def gen_intermittent_code(variable, trigger, trigger_prob, random_value):
#code = 'fault_prob = random.randint(1,100)'
code = 'if %s<=%s:'%(trigger,trigger_prob)
l = '//%s=%s' % (variable,random_value)
code = code + l
return code
### Write codes to fault library file
def write_to_file(code, exp_name, target_file, faultLoc):
if os.path.isdir('fault_library') != True:
os.makedirs('fault_library')
fileName = 'fault_library/scenario_'+str(sceneNum)
out_file = fileName+'.txt'
#param_file = fileName+'_params.csv'
with open(out_file, 'w') as outfile:
#print out_file
outfile.write('title:' + exp_name + '\n')
outfile.write('location//' + target_file+ '//'+faultLoc + '\n')
for i, line in enumerate(code):
outfile.write('fault ' + str(i+1) + '//' + line + '\n')
#outfile.write('Total number of fault cases: '+str(i+1))
with open('run_fault_inject_campaign.sh', 'a+') as runFile:
runFile.write('python run_openAPS.py '+fileName+'\n')
# def gen_glucose_add_fault(sceneNum):
# title = str(sceneNum)+'_glucose-add'
# #faultLibFile = 'fault_library/dRelPlantRad'
# fileLoc = 'updated_ct_script_iob_based.py'
# faultLoc = '#glucose:HOOK#'
# trigger = '_'
# trigger_time = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
# #trigger_code = ''
# code = []
# #param = []
# variable = "glucose"
# deltaRange = np.arange(0,300,20)
# for i in deltaRange:
# delta = i
# #code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
# code.append(gen_add_code(trigger, trigger_time, variable, delta))
# #param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
# write_to_file(code, title, fileLoc, faultLoc)
# def gen_glucose_sub_fault(sceneNum):
# title = str(sceneNum)+'_glucose-sub'
# #faultLibFile = 'fault_library/dRelPlantRad'
# fileLoc = 'updated_ct_script_iob_based.py'
# faultLoc = '#glucose:HOOK#'
# trigger = '_'
# trigger_time = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
# #trigger_code = ''
# code = []
# #param = []
# variable = "glucose"
# deltaRange = np.arange(0,300,20)
# for i in deltaRange:
# delta = i
# #code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
# code.append(gen_sub_code(trigger, trigger_time, variable, delta))
# #param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
# write_to_file(code, title, fileLoc, faultLoc)
def gen_glucose_stuck_fault(sceneNum):
title = str(sceneNum)+'_glucose-stuck'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#glucose:HOOK#'
trigger = '_'
trigger_time = 5 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "glucose"
deltaRange = np.arange(0,300,20)
for i in deltaRange:
delta = i
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_stuck_code(trigger, trigger_time, variable, delta))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
def gen_glucose_intermittent_fault(sceneNum):
title = str(sceneNum)+'_glucose-intermittent'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#glucose:HOOK#'
trigger = 'fault_prob'
random_value = 'random.randint(0,300)'
#trigger_prob = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "glucose"
ProbabilityRange = np.arange(10,100,10)
for trigger_prob in ProbabilityRange:
#delta = random.randint(0,300)
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_intermittent_code(variable, trigger, trigger_prob, random_value))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
def gen_temp_basal_stuck_fault(sceneNum):
title = str(sceneNum)+'_temp_basal_stuck'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#temp_basal:HOOK#'
trigger = '_'
trigger_time = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "temp_basal"
deltaRange = np.arange(0,6,1)
for i in deltaRange:
delta = i
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_stuck_code(trigger, trigger_time, variable, delta))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
def gen_temp_basal_intermittent_fault(sceneNum):
title = str(sceneNum)+'_temp_basal-intermittent'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#temp_basal:HOOK#'
trigger = 'fault_prob'
random_value = 'random.randint(0,6)'
#trigger_prob = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "temp_basal"
ProbabilityRange = np.arange(10,100,10)
for trigger_prob in ProbabilityRange:
#delta = random.randint(0,300)
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_intermittent_code(variable, trigger, trigger_prob, random_value))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
def gen_controller_output_stuck_fault(sceneNum):
title = str(sceneNum)+'_controller_output_stuck'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#rate:HOOK#'
trigger = '_'
trigger_time = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "rate"
deltaRange = np.arange(0,6,1)
for i in deltaRange:
delta = i
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_stuck_code(trigger, trigger_time, variable, delta))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
def gen_controller_output_intermittent_fault(sceneNum):
title = str(sceneNum)+'_controller_output-intermittent'
#faultLibFile = 'fault_library/dRelPlantRad'
fileLoc = 'updated_ct_script_iob_based.py'
faultLoc = '#rate:HOOK#'
trigger = 'fault_prob'
random_value = 'random.randint(0,6)'
#trigger_prob = 10 # 10 is an arbitrary number, I want the fault be injected after 10th iteration
#trigger_code = ''
code = []
#param = []
variable = "rate"
ProbabilityRange = np.arange(10,100,10)
for trigger_prob in ProbabilityRange:
#delta = random.randint(0,300)
#code.append(gen_add_code(trigger_code, trigger, t1, t2, variable, [delta], '//if '+variable[0]+'>=255:'+'// '+variable[0]+'= 254'))
code.append(gen_intermittent_code(variable, trigger, trigger_prob, random_value))
#param.append(','.join(['relative distance',str(t1),str(dt),str(delta)]))
write_to_file(code, title, fileLoc, faultLoc)
###_main_###
with open('run_fault_inject_campaign.sh', 'w') as runFile:
runFile.write('#Usage: python run_openAPS.py target_fault_library\n')
scenarios = {
1 : gen_glucose_stuck_fault,
2 : gen_glucose_intermittent_fault,
3 : gen_temp_basal_stuck_fault,
4 : gen_temp_basal_intermittent_fault,
5 : gen_controller_output_stuck_fault,
6 : gen_controller_output_intermittent_fault
}
for sceneNum in [1,2,3,4,5,6]:
scenarios[sceneNum](sceneNum)