install Rcpp and dfoptim

Techtonique · Jan 24, 2024 · 725c921 · 725c921
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commit 725c921
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Showing 3 changed files with 4 additions and 3 deletions.
diff --git a/.github/workflows/python-publish.yml b/.github/workflows/python-publish.yml
@@ -34,6 +34,7 @@ jobs:
           sudo apt-get install -y r-base
           sudo apt-get install -y libssl-dev libcurl4-openssl-dev libxml2-dev  
           mkdir bcn_r          
+          Rscript -e "try(utils::install.packages(c('Rcpp', 'dfoptim'), lib='./bcn_r', repos='https://cran.rstudio.com', dependencies = TRUE), silent=TRUE)"
           Rscript -e "try(utils::install.packages('bcn', lib='./bcn_r', repos='https://techtonique.r-universe.dev', dependencies = TRUE), silent=TRUE)"
 
       - name: Install Python Dependencies
@@ -67,4 +68,4 @@ jobs:
         uses: pypa/gh-action-pypi-publish@release/v1
         with: 
           password: ${{ secrets.PYPI_GLOBAL_BCN }}
-          repository-url: https://upload.pypi.org/legacy/
+          repository-url: https://upload.pypi.org/legacy/ 
diff --git a/BCN/BCNClassifier.py b/BCN/BCNClassifier.py
@@ -14,7 +14,7 @@
 
 r['options'](warn=-1)
 
-required_packages = ["bcn"]  # list of required R packages
+required_packages = ["Rcpp", "dfoptim", "bcn"]  # list of required R packages
 
 if all(rpackages.isinstalled(x) for x in required_packages):
     check_packages = True  # True if packages are already installed

diff --git a/BCN/BCNRegressor.py b/BCN/BCNRegressor.py
@@ -14,7 +14,7 @@
 
 r['options'](warn=-1)
 
-required_packages = ["bcn"]  # list of required R packages
+required_packages = ["Rcpp", "dfoptim", "bcn"]  # list of required R packages
 
 if all(rpackages.isinstalled(x) for x in required_packages):
     check_packages = True  # True if packages are already installed