Detect all Palindrome with distance restriction in Linear Time and Space.
- python version is Python 3.9.1
- download
- cd PalindromeDetector
- pip install -r requirements.txt
- Change parameters such as Threshold score, match/mismatch score, gap score and so on in parameters.txt.
- python3 main.py your_fasta_file_path
- Then, the result will be in your terminal.
- if you want
- python3 main.py your_fasta_file_path > output_file_path
python3 main.py ./testDNAseq.fasta > test_output.txt