PalindromeDetector

Detect all Palindrome with distance restriction in Linear Time and Space.

Version:

1. python version is Python 3.9.1

Installation:

1. download
2. cd PalindromeDetector
3. pip install -r requirements.txt

How to use:

1. Change parameters such as Threshold score, match/mismatch score, gap score and so on in parameters.txt.
2. python3 main.py your_fasta_file_path

• Then, the result will be in your terminal.

3. if you want

• python3 main.py your_fasta_file_path > output_file_path

For example

python3 main.py ./testDNAseq.fasta > test_output.txt