Update _quarto.yml #52
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| name: website | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| jobs: | ||
| build: | ||
| name: Build website with rmarkdown and Julia | ||
| runs-on: ubuntu-latest | ||
| container: stateofther/r-finistr2024:0.2 | ||
| steps: | ||
| - name: Checkout repository | ||
| uses: actions/checkout@v2 | ||
| - name: Install Julia | ||
| uses: julia-actions/setup-julia@v1 | ||
| with: | ||
| version: "1.8" # Specify the Julia version you want to use | ||
| - name: Install Julia Packages | ||
| run: | | ||
| julia -e 'using Pkg; Pkg.add(["DataFrames", "DataFramesMeta", "RDatasets", "CairoMakie", "Gadfly", "Compose", "AlgebraOfGraphics"])' | ||
| - name: Additional R packages | ||
| run: | | ||
| Rscript -e "install.packages(c('tictoc', 'nimble', 'ggmcmc', 'compareMCMCs', 'nimbleHMC', 'mvtnorm'))" | ||
| Rscript -e "install.packages(c('simulator', 'simpr', 'SimEngine', 'DT', 'withr', 'bench'))" | ||
| Rscript -e "install.packages(c('future', 'furrr', 'purrr', 'cli', 'RhpcBLASctl'))" | ||
| Rscript -e "install.packages('rix', repos = c('https://b-rodrigues.r-universe.dev', 'https://cloud.r-project.org'))" | ||
| - name: Additional Python packages | ||
| - name: Additional Python packages | ||
| run: | | ||
| pip install torch torch_geometric | ||
| pip install numpy==1.26.1 | ||
| pip install scikit-learn scikit-network networkx matplotlib tqdm openpyxl pandas | ||
| - name: Generate slides | ||
| run: "quarto render" | ||
| - name: GitHub Pages action | ||
| uses: peaceiris/actions-gh-pages@v3 | ||
| with: | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| publish_dir: ./_site | ||
