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_pkgdown.yaml
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title: RPiR
url: https://sbohvm.github.io/RPiR/
template:
bootstrap: 5
bootswatch: journal
reference:
- title: Lecture slides
desc: View lecture slides in RStudio
contents:
- '`available_lectures`'
- '`run_lecture`'
- title: Practicals
desc: Run practicals
contents:
- '`available_practicals`'
- '`run_practical`'
- title: Helper functions
desc: Functions used in Practical exercises
contents:
- 'assert_no_globals'
- '`plot_simple`'
- '`plot_populations`'
- '`run_simple`'
- '`run_simulation`'
- '`cleanup_times`'
- '`cleanup_events`'
- '`cleanup_timesteps`'
- '`practical_series_one`'
- '`populate_package`'
- title: Misc functions
desc: ~
contents:
- '`run_integration`'
- '`RPiR-package`'
navbar:
structure:
left: [lecture_slides, lecture_html, practicals, R, guides, installation]
right: [RPiR, discussion, github]
# type: inverse
components:
lecture_slides:
text: Lectures (slides)
icon: fas fa-chalkboard-teacher
menu:
- text: RPiR1-intro
href: lectures/RPiR1-intro.html
- text: RPiR2a-R
href: lectures/RPiR2a-R.html
- text: RPiR2b-modelling
href: lectures/RPiR2b-modelling.html
- text: RPiR2c-development
href: lectures/RPiR2c-development.html
- text: RPiR3a-R
href: lectures/RPiR3a-R.html
- text: RPiR3b-git
href: lectures/RPiR3b-git.html
- text: RPiR5a-reporting
href: lectures/RPiR5a-reporting.html
- text: RPiR5b-modelling
href: lectures/RPiR5b-modelling.html
- text: RPiR5c-R
href: lectures/RPiR5c-R.html
- text: RPiR7a-development (pdf)
href: lectures/RPiR7a-development.pdf
- text: RPiR7b-R
href: lectures/RPiR7b-R.html
- text: RPiR8a-packages
href: lectures/RPiR8a-packages.html
- text: RPiR8b-randomness (pdf)
href: lectures/RPiR8b-randomness.pdf
- text: RPiR8c-R
href: lectures/RPiR8c-R.html
- text: RPiR11a-diversity
href: lectures/RPiR11a-diversity.html
- text: RPiR11b-diversity (pdf)
href: lectures/RPiR11b-diversity.pdf
- text: RPiR12a-data
href: lectures/RPiR12a-data.html
- text: RPiR13a-programming
href: lectures/RPiR13a-programming.html
lecture_html:
text: Lectures (html)
icon: fas fa-chalkboard-teacher
menu:
- text: RPiR1-intro
href: lectures_html/RPiR1-intro.html
- text: RPiR2a-R
href: lectures_html/RPiR2a-R.html
- text: RPiR2b-modelling
href: lectures_html/RPiR2b-modelling.html
- text: RPiR2c-development
href: lectures_html/RPiR2c-development.html
- text: RPiR3a-R
href: lectures_html/RPiR3a-R.html
- text: RPiR3b-git
href: lectures_html/RPiR3b-git.html
- text: RPiR5a-reporting
href: lectures_html/RPiR5a-reporting.html
- text: RPiR5b-modelling
href: lectures_html/RPiR5b-modelling.html
- text: RPiR5c-R
href: lectures_html/RPiR5c-R.html
- text: RPiR7b-R
href: lectures_html/RPiR7b-R.html
- text: RPiR8a-packages
href: lectures_html/RPiR8a-packages.html
- text: RPiR8c-R
href: lectures_html/RPiR8c-R.html
- text: RPiR11a-diversity
href: lectures_html/RPiR11a-diversity.html
- text: RPiR12a-data
href: lectures_html/RPiR12a-data.html
- text: RPiR13a-programming
href: lectures_html/RPiR13a-programming.html
practicals:
text: "Practicals (html)"
icon: fas fa-chalkboard-teacher
menu:
- text: Practical1-6
href: tutorials/practical1-6/practical1-6.html
- text: Practical2-1
href: tutorials/practical2-1/practical2-1.html
- text: Practical2-2
href: tutorials/practical2-2/practical2-2.html
- text: Practical2-3
href: tutorials/practical2-3/practical2-3.html
- text: Practical2-4
href: tutorials/practical2-4/practical2-4.html
- text: Practical3-1
href: tutorials/practical3-1/practical3-1.html
- text: Practical3-2
href: tutorials/practical3-2/practical3-2.html
- text: Practical3-3
href: tutorials/practical3-3/practical3-3.html
- text: Practical3-4
href: tutorials/practical3-4/practical3-4.html
- text: Practical3-5
href: tutorials/practical3-5/practical3-5.html
- text: Practical3-6
href: tutorials/practical3-6/practical3-6.html
- text: Practical4-1
href: tutorials/practical4-1/practical4-1.html
- text: Practical4-2
href: tutorials/practical4-2/practical4-2.html
- text: Practical4-3
href: tutorials/practical4-3/practical4-3.html
- text: Project-Intro
href: tutorials/project0/project0.html
- text: Project1
href: tutorials/project1/project1.html
- text: Project2
href: tutorials/project2/project2.html
- text: Project3
href: tutorials/project3/project3.html
- text: Project4
href: tutorials/project4/project4.html
- text: Project5
href: tutorials/project5/project5.html
RPiR:
icon: fab fa-earlybirds
href: reference/index.html
R:
text: R
icon: fas fa-laptop-code
menu:
- text: Loops -- for / while
href: articles/pages/loops.html
- text: Flow control -- if / else and comparisons
href: articles/pages/flow.html
- text: Functions
href: articles/pages/functions.html
- text: document(), install(), and library()
href: articles/pages/devtools.html
- text: Debugging
href: articles/pages/debugging.html
- text: Tips and tricks
href: articles/pages/tips.html
guides:
text: Guides
icon: far fa-file-alt
menu:
- text: Course preparation - R
href: articles/pages/install_R.html
- text: Course preparation - GitHub
href: articles/pages/install_github.html
- text: Course preparation - RPiR
href: articles/pages/install_RPiR.html
- text: Course preparation - troubleshooting
href: articles/pages/install_troubleshooting.html
- text: GitHub repositories
href: articles/pages/github.html
- text: RStudio projects and GitHub
href: articles/pages/rstudio.html
- text: Create an R Package
href: articles/pages/packages_guide.html
- text: Reference - R Packages
href: articles/pages/packages.html
- text: Reference - R Notebook
href: articles/pages/notebooks.html
- text: Reference - General
href: articles/pages/reference.html
- text: VS Code Live Share
href: articles/pages/vscode_liveshare.html
discussion:
icon: far fa-comments
href: https://github.com/SBOHVM/RPiR/discussions
github:
icon: fab fa-github
href: https://github.com/SBOHVM/RPiR/