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DESCRIPTION
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Package: echoLD
Type: Package
Title: echoverse module: LD downloading and processing
Version: 0.99.10
Authors@R:
c(person(given = "Brian",
family = "Schilder",
role = c("cre"),
email = "brian_schilder@alumni.brown.edu",
comment = c(ORCID = "0000-0001-5949-2191")),
person(given = "Jack",
family = "Humphrey",
role = c("aut"),
email = "Jack.Humphrey@mssm.edu",
comment = c(ORCID = "0000-0002-6274-6620")),
person(given = "Towfique",
family = "Raj",
role = c("aut"),
email = "towfique.raj@mssm.edu",
comment = c(ORCID = "0000-0002-9355-5704"))
)
Description: echoverse module: LD downloading and processing.
URL: https://github.com/RajLabMSSM/echoLD
BugReports: https://github.com/RajLabMSSM/echoLD/issues
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.1)
SystemRequirements: Python (>= 3.7.0)
biocViews:
Imports:
echotabix,
downloadR,
echodata,
echoconda,
dplyr,
methods,
Matrix,
data.table,
reticulate,
GenomicRanges,
VariantAnnotation,
snpStats,
tools
Suggests:
markdown,
rmarkdown,
remotes,
knitr,
BiocStyle,
covr,
testthat (>= 3.0.0),
gaston,
graphics,
LDlinkR,
adjclust,
badger,
parallel
Remotes:
github::RajLabMSSM/echotabix,
github::RajLabMSSM/downloadR,
github::RajLabMSSM/echodata,
github::RajLabMSSM/echoconda
RoxygenNote: 7.3.1
VignetteBuilder: knitr
License: GPL (>= 3)
Config/testthat/edition: 3
Config/reticulate:
list(
packages = list(
list(package = "pandas")
)
)