#Network Analysis in R: Bridging R and Cytoscape

Covers:

Introduction to the igraph package for basic network construction.

Demonstration of methods to transfer networks from R to Cytoscape for more advanced visualisation.

Structural analysis of yeast protein interaction network, module detection and visualisation in Cytoscape.

Requires:
Cytoscape 3.2.1+ with Java 8 and the CyREST app installed
R Packages: httr, RSONIO, gplots, RCy3