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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(calculate,geneSBML)
S3method(components,geneSBML)
S3method(count,geneSBML)
S3method(fit,geneSBML)
S3method(plot,geneSBML)
S3method(print,geneSBML)
S3method(visualize,geneSBML)
export(annotate_bigg)
export(build_geneSBML)
export(calculate.geneSBML)
export(check_geneSBML)
export(components.geneSBML)
export(count.geneSBML)
export(extract_genes)
export(extract_subsystems)
export(fit.geneSBML)
export(geneSBML)
export(gene_to_react)
export(is_SBML)
export(is_geneSBML)
export(plot.geneSBML)
export(react_to_gene)
export(react_to_metab)
export(suba)
export(visualize.geneSBML)
importFrom(BiGGR,buildSBMLFromReactionIDs)
importFrom(BiGGR,createLIMFromSBML)
importFrom(BiGGR,extractGeneAssociations)
importFrom(Rcpp,sourceCpp)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,as_tibble)
importFrom(dplyr,count)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,tibble)
importFrom(dplyr,top_n)
importFrom(dplyr,ungroup)
importFrom(furrr,furrr_options)
importFrom(furrr,future_map)
importFrom(future,plan)
importFrom(generics,calculate)
importFrom(generics,components)
importFrom(generics,fit)
importFrom(generics,visualize)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_y_discrete)
importFrom(ggplot2,theme)
importFrom(graph,`edgeData<-`)
importFrom(graph,`edgeDataDefaults<-`)
importFrom(graph,`nodeDataDefaults<-`)
importFrom(graph,edgeDataDefaults)
importFrom(graph,nodeDataDefaults)
importFrom(methods,hasArg)
importFrom(methods,slot)
importFrom(purrr,compact)
importFrom(purrr,map)
importFrom(purrr,map2_chr)
importFrom(purrr,map2_dfr)
importFrom(purrr,map_chr)
importFrom(purrr,map_dbl)
importFrom(purrr,map_dfc)
importFrom(purrr,map_lgl)
importFrom(purrr,reduce)
importFrom(purrr,safely)
importFrom(purrr,transpose)
importFrom(rlang,`!!`)
importFrom(rlang,`.data`)
importFrom(rlang,`.env`)
importFrom(rlang,set_names)
importFrom(stats,complete.cases)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,pnorm)
importFrom(stats,qnorm)
importFrom(stats,reorder)
importFrom(stringi,stri_detect)
importFrom(stringi,stri_extract)
importFrom(stringi,stri_extract_all)
importFrom(stringi,stri_replace)
importFrom(stringi,stri_replace_all)
importFrom(stringi,stri_replace_first_fixed)
importFrom(stringi,stri_split)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
useDynLib(biggrExtra)