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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 946 458

  2. Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 236 75

  3. Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 282 141

  4. Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 33

  5. CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 85 62

  6. PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 191 90

Repositories

Showing 10 of 324 repositories
  • dbt-synthea Public

    [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM

    Python 25 Apache-2.0 8 17 2 Updated Apr 19, 2025
  • ShinyProxyDeploy Public

    Deploy OHDSI Shiny apps to results.ohdsi.org

    0 3 0 0 Updated Apr 19, 2025
  • OhdsiExampleStudyApp Public
    Dockerfile 0 0 0 0 Updated Apr 19, 2025
  • WebAPI Public

    OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

    Java 137 Apache-2.0 171 124 (1 issue needs help) 18 Updated Apr 18, 2025
  • d2e Public

    Data2Evidence is an end-to-end solution for management of OMOP data - https://data2evidence.org

    TypeScript 15 Apache-2.0 0 0 17 Updated Apr 18, 2025
  • Capr Public

    Cohort definition Application Programming in R

    R 17 Apache-2.0 16 7 3 Updated Apr 18, 2025
  • CommunityDashboard Public

    Dashboard to monitor the health of the OHDSI community. A Flask app of Dash Dashboards for tracking public API's

    TypeScript 6 Apache-2.0 1 11 0 Updated Apr 17, 2025
  • Strategus Public

    An R package for coordinating and executing analytics using HADES modules

    R 6 11 17 3 Updated Apr 17, 2025
  • OmopSketch Public
    R 3 Apache-2.0 0 10 1 Updated Apr 17, 2025
  • DatabaseConnector Public

    An R package for connecting to databases using JDBC.

    R 56 86 37 (1 issue needs help) 1 Updated Apr 17, 2025
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