| title | permalink | layout |
|---|---|---|
BOSC 2007 Schedule |
BOSC_2007_Schedule |
wiki |
| Thursday July 19th | Friday July 20th | |
|---|---|---|
| 8:45am | Call To Order | Call To Order |
| 9:00am | Keynote Speaker: Carole Goble **SLIDES** | [[BOSC_2007_Abstracts#.5BOS_Software.5D_The_ONDEX_Data_Integration_Framework | [OS Software] Jan Taubert: The ONDEX Data Integration Framework]] **SLIDES** |
| 9:20am | [[BOSC_2007_Abstracts#.5BOS_Software.5D_CGEMS:_An_Open-Source_caIntegrator_Application_to_support_Whole_Genome_Association_Studies | [OS Software] Subhashree Madhavan: CGEMS: An Open-Source caIntegrator Application to support Whole Genome Association Studies]] | |
| 9:40am | [[BOSC_2007_Abstracts#.5BOS_Software.5D_Modware:_An_Object-Oriented_Perl_Interface_to_the_Chado_Schema | [OS Software] Eric Just: Modware: An Object-Oriented Perl Interface to the Chado Schema]] **SLIDES** | |
| 10:00 | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_The_Galaxy_Framework_for_Computational_Biology_Tool_Integration | [New Technology] James Taylor: The Galaxy Framework for Computational Biology Tool Integration]] **SLIDES** | [[BOSC_2007_Abstracts#.5BOS_Software.5D_XRATE:_Scheme-y_trees.2C_phylo-HMMs_and_phylo-grammars | [OS Software] Ian Holmes: XRATE: Scheme-y trees, phylo-HMMs and phylo-grammars]] |
| 10:20 | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_AJAX_GBrowse:_Community_Genome_Annotation_Made_Easy | [New Technology] Mitch Skinner: AJAX GBrowse: Community Genome Annotation Made Easy]] **SLIDES** | [[BOSC_2007_Abstracts#.5BOS_Software.5D_E-Cell_3D:_3-Dimensional_Visualization_Front-End_for_E-Cell_Simulation_Environment | [OS Software] Kazuharu Arakawa: E-Cell 3D: 3-Dimensional Visualization Front-End for E-Cell Simulation Environment]] |
| 10:30am | Coffee | Coffee |
| 11:00am | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_Dasty2:_A_Web_Client_for_Visualizing_Protein_Sequence_Features | [New Technology] Rafael C. Jimenez: Dasty2: A Web Client for Visualizing Protein Sequence Features]] **SLIDES** | [[BOSC_2007_Abstracts#.5BOS_Software.5D_XMLPipeDB:_A_Reusable.2C_Open_Source_Tool_Chain_for_Building_Relational_Databases_from_XML_Sources | [OS Software] Kam Dahlquist: XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources]] **SLIDES** |
| 11:20am | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_EMBRACE_Web_Services | [New Technology] Taavi Hupponen: EMBRACE Web Services]] **SLIDES** | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_An_Open_Source_Framework_for_Teaching_Bioinformatics | [Software Design And Engineering] Kam Dahlquist: An Open Source Framework for Teaching Bioinformatics]] **SLIDES** |
| 11:40 | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_CaGrid_Cancer_Biomedical_Informatics_Grid | [New Technology] Krishnakant Shanbhag: CaGrid Cancer Biomedical Informatics Grid]] **SLIDES** | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_Tools_to_Facilitate_Large_Scale_Comparative_Genomic_Analysis | [Software Design And Engineering] James Taylor: Tools to Facilitate Large Scale Comparative Genomic Analysis]] **SLIDES** |
| 11:50 | ||
| 12:00 | Lunch | Lunch |
| 1:30pm | Martin Senger: BioMoby Project Update | [Lightning Talk] Eric Jain: beta.uniprot.org -- Another Piece of Life Sciences Infrastructure Built on Open Source Software |
| 1:45pm | Tom Oinn: MyGrid/Taverna Project Update **SLIDES** | [Lightning Talk] Toshiaki Katayama -- Introduction of the Japanese Open Bio* community **SLIDES** |
| 2:00pm | Richard Holland: BioJava Project Update | [Lightning Talk] Kazuharu Arakawa -- G-Language Project |
| 2:15pm | Arek Kasprzyk: BioMart Project Update **SLIDES** | [Lightning Talk] Henrik Abelsson: Mitrion-C Accellerated NCBI Blast Application |
| 2:30pm | Peter Cock: BioPython Project Update 2007 **SLIDES** | [Lightning Talk] Shawn Houston: The Compute Portal Project |
| 2:45 | Toshiaki Katayama: BioRuby Project Update **SLIDES** | Interactive Wifi Workshops |
| 3:00pm | Jason Stajich: BioPerl Project Update **SLIDES** | Interactive Wifi Workshops |
| 3:15pm | Peter Rice: EMBOSS Project Update | Interactive Wifi Workshops |
| 3:30pm | Coffee | Coffee |
| 4:00pm | Glenn Proctor: Ensembl Project Update | Interactive Wifi Workshops |
| 4:15pm | Discuss the Creation of an OBF Distribution CD | Interactive Wifi Workshops |
| 5:00pm | Interactive Wifi Workshops | Interactive Wifi Workshops |