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pyproject.toml
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[build-system]
requires = ["setuptools>=64", "setuptools_scm[toml]>=6.2"]
build-backend = "setuptools.build_meta"
[project]
name = "biomero"
dynamic = ["version"]
authors = [
{ name = "Torec Luik", email = "t.t.luik@amsterdamumc.nl" },
{ name = "Core Facility - Cellular Imaging" },
{ email = "cellularimaging@amsterdamumc.nl"}
]
description = "A python library for easy connecting between OMERO (jobs) and a Slurm cluster"
readme = "README.md"
requires-python = ">=3.8"
keywords = ["omero", "slurm", "high-performance-computing", "fair", "image-analysis", "bioimaging", "high-throughput-screening", "high-content-screening", "cytomine", "biomero", "biaflows"]
license = { file = "LICENSE" }
classifiers = [
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"License :: OSI Approved :: Apache Software License",
"Operating System :: OS Independent",
]
dependencies = [
"requests==2.31.0",
"requests-cache==1.1.1",
"fabric==3.1.0",
"paramiko==3.4.0",
"importlib_resources>=5.4.0",
"eventsourcing==9.3",
"sqlalchemy==2.0.32",
"psycopg2==2.9.9",
"eventsourcing_sqlalchemy==0.9"
]
[tool.setuptools.packages]
find = {} # Scan the project directory with the default parameters
[tool.setuptools_scm]
[project.optional-dependencies]
test = [
"pytest",
"pytest-cov",
"mock",
"psycopg2-binary"
]
[project.urls]
"Homepage" = "https://github.com/NL-BioImaging/biomero"
"Documentation" = "https://nl-bioimaging.github.io/biomero/"